Author

A. R. Bourgonje

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell-cell communication· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Research Focus:clustering· 1

Frequent Co-Authors

R. K. Weersma· 3 shared S. Hu· 3 shared A. Kurilshikov· 2 shared A. Vich Vila· 2 shared A. Weinberger· 2 shared A. Zhernakova· 2 shared C. Wijmenga· 2 shared E. A. M. Festen· 2 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersImmunology

R. K. Weersma

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3 papers

Recent·Most cited

Mucosal host-microbe interactions associate with clinical phenotypes in inflammatory bowel disease

S. Hu, A. R. Bourgonje, R. Gacesa, B. H. Jansen, J. R. Björk, A. Bangma, I. J. Hidding, H. M. van Dullemen, M. C. Visschedijk, K. N. Faber, G. Dijkstra, H. J. M. Harmsen, E. A. M. Festen, A. Vich Vila, L. M. Spekhorst, R. K. Weersma

This study identifies host-microbe interactions in IBD by analyzing transcriptomic and microbial data from intestinal biopsies, linking specific bacteria to gene pathways and clinical phenotypes.

bioRxiv · Jun 4, 2022Microbiology

In-depth characterization of the serum antibody epitope repertoire in inflammatory bowel disease using phage-displayed immunoprecipitation sequencing

A. R. Bourgonje, S. Andreu-Sanchez, T. Vogl, S. Hu, A. V. Vila, R. Gacesa, S. Leviatan, A. Kurilshikov, S. Klompus, I. N. Kalka, H. M. van Dullemen, A. Weinberger, M. C. Visschedijk, E. A. M. Festen, K. N. Faber, , R. K. Weersma

This study identifies distinct antibody epitope repertoires in IBD patients using PhIP-seq, revealing differentially abundant antibodies associated with disease subtypes and features.

bioRxiv · Dec 7, 2021Immunology

Genetic, environmental and intrinsic determinants of the human antibody epitope repertoire

S. Andreu-Sanchez, A. R. Bourgonje, T. Vogl, A. Kurilshikov, S. Leviatan, A. J. Ruiz Moreno, S. Hu, T. Sinha, A. Vich Vila, S. Klompus, I. Kalka, K. de Leeuw, S. Arends, I. H. Jonkers, S. Withoff, , A. Zhernakova

This study uses PhIP-Seq to analyze antibody repertoires in 1,443 individuals, showing genetic and environmental factors influence antibody diversity and phenotype associations.

bioRxiv · Dec 7, 2021Immunology