Author

Aliaksei Z. Holik

Barcelona Institute of Science and Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:ChIP-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Organism:mouse· 1

Frequent Co-Authors

Albert Y ZhangiD· 1 shared Ashley P. NgiD· 1 shared Charity W. LawiD· 1 shared Charlotte N. HoriD· 1 shared Jon PermanyeriD· 1 shared Júlia Albaigès· 1 shared Manuel IrimiaiD· 1 shared Mara DiersseniD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Albert Y ZhangORCID

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2 papers

Recent·Most cited

Environmental enrichment induces epigenomic and genome organization changes relevant for cognitive function

Sergio Espeso‐Gil, Aliaksei Z. Holik, Sarah Bonnin, Shalu Jhanwar, Sandhya Chandrasekaran, Roger Piqué-Regi, Júlia Albaigès, Michael Maher, Jon Permanyer, Manuel Irimia, Marc R. Friedländer, Meritxell Pons‐Espinal, Schahram Akbarian, Mara Dierssen, Philipp G. Maass, , Stephan Ossowski

This study shows environmental enrichment alters chromatin structure, transcription factor binding, and 3D genome organization in mice, affecting cognitive function and gene regulation.

Frontiers in Molecular Neuroscience · May 5, 2021Peer-reviewedNeuroscience

Covering all your bases: incorporating intron signal from RNA-seq data

Stuart A. Lee, Albert Y Zhang, Shian Su, Ashley P. Ng, Aliaksei Z. Holik, Marie-Liesse Asselin-Labat, Matthew E. Ritchie, Charity W. Law

The paper demonstrates that intron reads from RNA-seq are informative and introduces methods to analyze them for transcriptional changes and intron retention.

NAR Genomics and Bioinformatics · Sep 1, 2020Peer-reviewedBioinformatics