Author

B. Sanford

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 3 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Research Focus:drug response / drug discovery· 2

Frequent Co-Authors

R. Vibhakar· 3 shared K. L. Jones· 2 shared N. K. Foreman· 2 shared S. Venkataraman· 2 shared T. C. Hankinson· 2 shared A. Donson· 1 shared A. Garancher· 1 shared A. K. Kimball· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersCancer Biology

R. Vibhakar

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Rapid PTEFb-dependent transcriptional reorganization underpins the glioma adaptive response to radiotherapy

F. M. Walker, L. Martin Sobral, E. Danis, B. Sanford, I. Balakrishnan, D. Wang, A. Pierce, S. D. Karam, N. J. Serkova, N. K. Foreman, S. Venkataraman, R. Dowell, R. Vibhakar, N. A. Dahl

The paper shows that PTEFb enables rapid transcriptional reorganization in glioma cells after radiotherapy, enhancing survival, and that inhibiting PTEFb reduces this response and increases cell death.

bioRxiv · Jan 24, 2023 · PreprintCancer Biology

Neoplastic and Immune single cell transcriptomics define subgroup-specific intra-tumoral heterogeneity of childhood medulloblastoma.

K. A. Riemondy, S. Venkataraman, N. Willard, A. Nellan, B. Sanford, A. M. Griesinger, V. Amani, S. Mitra, T. C. Hankinson, M. H. Handler, M. Sill, J. Ocasio, S. J. Weir, D. S. Malawsky, T. R. Gershon, , R. Vibhakar

The paper uses single-cell transcriptomics to identify subgroup-specific neoplastic and immune cell heterogeneity in childhood medulloblastoma.

bioRxiv · Aug 28, 2020Cancer Biology

Redefining De Novo Gammaherpesvirus Infection Through High-Dimensional, Single-Cell Analysis of Virus and Host

J. N. Berger, B. Sanford, A. K. Kimball, L. M. Oko, R. E. Kaspar, B. F. Niemeyer, K. L. Jones, E. T. Clambey, L. F. van Dyk

This paper uses single-cell RNA sequencing and mass cytometry to analyze variation in viral and host gene expression during de novo gammaherpesvirus infection.

bioRxiv · Aug 11, 2020 · PreprintMicrobiology

Comprehensive molecular characterization of pediatric treatment-induced high-grade glioma: A distinct entity despite disparate etiologies with defining molecular characteristics and potential therapeutic targets

J. DeSisto, J. T. Lucas, K. Xu, A. Donson, T. Lin, B. Sanford, Q. T. Tran, D. Hedges, C.-Y. Hsu, G. T. Armstrong, M. Arnold, S. Bhatia, P. Flannery, R. Lemma, L. Hardie, , A. L. Green

This study characterizes treatment-induced high-grade gliomas (TIHGGs) through molecular profiling, identifying distinct subgroups and potential therapeutic targets.

bioRxiv · Oct 29, 2019 · PreprintCancer Biology