Author

Charlie Seibert

Frederick National Laboratory for Cancer Research

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Michael C. KellyiD· 2 shared Alexei Lobanov· 1 shared Anton GoretskyiD· 1 shared Antonella SassanoiD· 1 shared Arindam GhoshiD· 1 shared Augustin LunaiD· 1 shared Ayşe Gökçe KeşküşiD· 1 shared Bao Quoc TraniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersCancer Biology

Michael C. KellyORCID

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2 papers

Recent·Most cited

Dynamic Schlafen 11 (SLFN11) expression revealed by single-cell RNA sequencing of clonal human cancer cells

Daiki Taniyama, Yoshitaka Inoue, Fathi Elloumi, Yoo Sun Kim, Nitin Roper, Charlie Seibert, Michael C. Kelly, Alexei Lobanov, Mirit I. Aladjem, Augustin Luna, Yves Pommier

The paper uses single-cell RNA sequencing to show heterogeneous SLFN11 expression in cancer cells, linking it to stress response and genome maintenance.

bioRxiv · Oct 7, 2026 · PreprintCancer Biology

Long-read sequencing of single cell-derived melanoma subclones reveals divergent and parallel genomic and epigenomic evolutionary trajectories

Yuelin Liu, Anton Goretsky, Ayşe Gökçe Keşküş, Salem Malikić, Tanveer Ahmad, E. Michael Gertz, Farid Rashidi Mehrabadi, Michael C. Kelly, Maria Hernandez, Charlie Seibert, Juan Manuel Caravaca, Kayla Kline, Yongmei Zhao, Ying Wu, Biraj Shrestha, , Mikhail Kolmogorov

The paper uses long-read sequencing to analyze genomic and epigenomic changes in melanoma subclones, revealing parallel evolutionary paths and lineage-specific methylation patterns.

bioRxiv · Aug 28, 2025 · PreprintGenomics