Author

Ying Wu

Frederick National Laboratory for Cancer ResearchORCID 0000-0002-0896-896XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Ying Wu4 papers · Mayo Clinic

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Organism:human· 2 Organism:Arabidopsis· 1 Assay:ATAC-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

Andy D. TraniD· 1 shared Anton GoretskyiD· 1 shared Antonella SassanoiD· 1 shared Apsen Hsu· 1 shared Arindam GhoshiD· 1 shared Ayşe Gökçe KeşküşiD· 1 shared Bao Quoc TraniD· 1 shared Biraj Shrestha· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperCell Biology

Andy D. TranORCID

Author profile →

4 papers

Recent·Most cited

Integrated multi-omic analysis of pediatric metastatic osteosarcoma reveals endothelial cell plasticity and lineage infidelity.

Julian Burks, Ying Wu, Krithika Bhuvaneshwar, Neeraja Syed, Dahee Jung, Carly M. Sayers, Demond Williams, Swapna Vidhur Daulatabad, Therry Malone, Julie Galindo, Monica Mendez, Jennifer Cotter, Jovana Pavisic, Yoh‐suke Mukouyama, Jack F. Shern, , Troy A. McEachron

bioRxiv · Aug 12, 2026 · PreprintCancer Biology

Ubiquitin-dependent recruitment of SLFN11 to chromatin is regulated by deubiquitinase and RNF168

Ukhyun Jo, Daiki Taniyama, Gianluca Pegoraro, Ying Wu, Shar-yin Huang, Craig J. Thomas, Laurent Ozbun, Andy D. Tran, Liton Saha, Junko Murai, Yves G. Pommier

The paper identifies that DUB inhibitors and RNF168-mediated ubiquitylation drive SLFN11 chromatin recruitment, particularly at promoters, and that this process is suppressed by TAK243.

bioRxiv · Mar 27, 2026 · PreprintCell Biology

Long-read sequencing of single cell-derived melanoma subclones reveals divergent and parallel genomic and epigenomic evolutionary trajectories

Yuelin Liu, Anton Goretsky, Ayşe Gökçe Keşküş, Salem Malikić, Tanveer Ahmad, E. Michael Gertz, Farid Rashidi Mehrabadi, Michael C. Kelly, Maria Hernandez, Charlie Seibert, Juan Manuel Caravaca, Kayla Kline, Yongmei Zhao, Ying Wu, Biraj Shrestha, , Mikhail Kolmogorov

The paper uses long-read sequencing to analyze genomic and epigenomic changes in melanoma subclones, revealing parallel evolutionary paths and lineage-specific methylation patterns.

bioRxiv · Aug 28, 2025 · PreprintGenomics

Clade V MLO proteins are bona fide host susceptibility factors required for powdery mildew pathogenesis in Arabidopsis

David Bloodgood, Qiong Zhang, Pai Li, Ying Wu, Michael Pan, Christina Zhou, Apsen Hsu, Jun Zhang, Ralph Panstruga, Sharon A. Kessler, Ping He, Libo Shan, Chang-I Wei, Shunyuan Xiao

bioRxiv · Jun 18, 2025 · PreprintPlant Biology