Author

Charmy J Patel

Georgia Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:non-human primate· 1 Assay:proteomics· 1 Organism:rat· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Daryll A. VanoveriD· 2 shared Hannah E. PeckiD· 2 shared Philip J. SantangeloiD· 2 shared Adrianus C. M. BooniD· 1 shared Blake A. Miller· 1 shared Derek J. SmithiD· 1 shared Elex S. HarrisiD· 1 shared Heather PathakiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMicrobiology

Daryll A. VanoverORCID

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Author profile →

2 papers

Recent·Most cited

Antigenic characterization of SARS-CoV-2 variants BA.3.2.1 and BA.3.2.2 in three animal models

Samuel A. Turner, Joey Olivier, Madison L Ellis, Katharine A. Floyd, Lilin Lai, Suzanne M. Scheaffer, Ionsei Hastings, Tamarand L. Darling, Blake A. Miller, Charmy J Patel, Hannah E. Peck, Daryll A. Vanover, Philip J. Santangelo, Michael S. Diamond, Mehul S. Suthar, , Derek J. Smith

This study characterizes the antigenic properties of SARS-CoV-2 variants BA.3.2.1 and BA.3.2.2 in three animal models and finds they are antigenically divergent from existing variants with lower homologous serum titers.

bioRxiv · May 26, 2026 · PreprintMicrobiology

CRISP enables comparisons of image-based spatial transcriptomicsegmentation quality across ten organs

James R Rose, Elex S. Harris, José A. F. Assumpção, Heather Pathak, Hannah E. Peck, Loren E. Sasser, Charmy J Patel, Daryll A. Vanover, Philip J. Santangelo

The paper benchmarks cell segmentation algorithms for spatial transcriptomics across ten mouse tissues, finding a tradeoff between transcript capture and cell purity, with Proseg performing best overall.

bioRxiv · Apr 21, 2026 · PreprintBioinformatics