Author

D. T. Rubin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3 Pathology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Research Focus:host-pathogen & immune response· 3 Organism:human· 3 Assay:metagenomics· 3 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

A. M. Eren· 3 shared C. Liu· 2 shared C. M. Cham· 2 shared C. R. Weber· 2 shared E. B. Chang· 2 shared H. G. Morrison· 2 shared K. Lolans· 2 shared A. Basu· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

A. M. Eren

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Untangling the Role of Pathobionts from Bacteroides Species in Inflammatory Bowel Diseases

Y. Shan, J. Lake, C. M. Cham, M. Zhu, D. Kaur, D. Ringus, N. Fei, C. R. Weber, M. Spedale, B. Theriault, S. Dalal, D. T. Rubin, A. Fiebig, S. Crosson, K. Lolans, , E. B. Chang

This study shows that Bacteroides fragilis from UC patients promotes colitis in genetically susceptible mice, suggesting a role for pathobionts in IBD.

bioRxiv · Oct 29, 2023 · PreprintMicrobiology

Intestinal Epithelial Heat Shock Protein 25/27 integrates host and microbial drivers of mucosal restitution following inflammatory injury

C. M. Cham, J. S. Messer, J. M. Lake, X. Zhu, Y. Tao, L. He, C. R. Weber, F. Lin, Z. Dai, J. Tong, S. Temelkova, D. T. Rubin, C. Liu, E. B. Chang

This study identifies Hsp25/27 as a key mediator of mucosal healing by integrating host and microbial signals in intestinal epithelial cells following inflammatory injury.

bioRxiv · Jun 30, 2022 · PreprintPathology

Metabolic independence drives gut microbialcolonization and resilience in health and disease

A. R. Watson, J. Fuessel, I. Veseli, J. Z. DeLongchamp, M. Silva, F. Trigodet, K. Lolans, A. Shaiber, E. Fogarty, J. M. Runde, C. Quince, M. K. Yu, A. Soylev, H. G. Morrison, S. T. M. Lee, , A. M. Eren

This study investigates how metabolic independence influences gut microbial colonization and resilience in health and disease using fecal microbiota transplantation.

bioRxiv · Mar 2, 2021Microbiology

High-resolution tracking of microbial colonization in Fecal Microbiota Transplantation experiments via metagenome-assembled genomes

S. T. Lee, S. A. Kahn, T. O. Delmont, N. A. Hubert, H. G. Morrison, D. A. Antonopoulos, D. T. Rubin, A. M. Eren

This study tracks microbial colonization in FMT experiments using metagenome-assembled genomes to identify colonization patterns and factors influencing success.

bioRxiv · Dec 2, 2016Microbiology