Author

G. Ji

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 4 Immunology· 2 Plant Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Assay:cryo-EM· 4 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Research Focus:imputation· 3 Organism:plant (other)· 3 Approach:statistical model· 3 Research Focus:differential expression· 2

Frequent Co-Authors

F. Sun· 4 shared S. Li· 4 shared J. Zhang· 3 shared T. Niu· 3 shared H. Li· 2 shared L. Ma· 2 shared S. Zhu· 2 shared T. Wang· 2 shared

Activity by Year

2019-2022 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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4 shared papersBiophysics

F. Sun

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

HOPE-SIM, a cryo-structured illumination fluorescence microscopy system for accurately targeted cryo-electron tomography

S. Li, X. Jia, T. Niu, X. Zhang, C. Qi, W. Xu, H. Deng, F. Sun, G. Ji

The paper introduces HOPE-SIM, a cryo-CLEM system that improves targeting precision for cryo-ET by integrating 3D SIM and software, achieving 150 nm correlation accuracy.

bioRxiv · Sep 16, 2022 · PreprintBiophysics

ELI trifocal microscope: A precise cryogenic fabrication system to prepare target cryo-lamellae of cells for in situ cryo-ET study

S. Li, Z. Wang, X. Jia, T. Niu, J. Zhang, G. Yin, X. Zhang, Y. Zhu, G. Ji, F. Sun

The paper introduces ELI-TriScope, a cryogenic system for precise cryo-lamella preparation, achieving 100% success in targeting HeLa cell centrosomes for cryo-ET structural analysis.

bioRxiv · Aug 15, 2022 · PreprintBiophysics

Frequency of change determines effectiveness of microbial response strategies in sulfidic stream microbiomes

S. Li, D. Mosier, X. Dong, A. Kouris, G. Ji, M. Strous, M. Diao

This study investigates how microbial response strategies vary with environmental change frequency in sulfidic stream microbiomes, finding that rapid changes favor stochasticity and bet-hedging, while slow changes benefit codon-usage bias.

bioRxiv · Apr 1, 2022Microbiology

Alternative 3' UTRs contributes to post-transcriptional gene expression regulation under high salt stress

T. Wang, W. Ye, J. Zhang, H. Li, W. Zeng, S. Zhu, G. Ji, X. Wu, L. Ma

The paper investigates how alternative 3' UTRs regulate gene expression in response to high salt stress in Spartina alterniflora, showing that 3' UTR lengthening enhances RNA stability and protein synthesis of stress-related genes.

bioRxiv · Mar 4, 2022Plant Biology

Age-related Impairment of Implant Osseointegration is Associated with Immune Activation and Suppression of Angiogenic, Notch, and Wnt Pathways

K. Turajane, G. Ji, Y. Chinenov, M. Chao, U. M. Ayturk, M. B. Greenblatt, L. B. Ivashkiv, M. P. G. Bostrom, X. Yang

This study identifies age-related downregulation of angiogenic, Notch, and Wnt pathways in peri-implant tissue, linked to immune activation and impaired osseointegration in aged mice.

bioRxiv · Dec 27, 2020 · PreprintImmunology

Bmp8a Is a Novel Player in Regulation of Antiviral Immunity

S. Zhong, H. Li, Y. Wang, Y. Wang, G. Ji, H. Li, S. Zhang, Z. Liu

This study identifies Bmp8a as a positive regulator of antiviral immunity, showing its role in enhancing type I IFN production and reducing viral load in zebrafish.

bioRxiv · Aug 9, 2020 · PreprintImmunology

Amorphous nickel titanium alloy film: a new choice for cryo electron microscopy sample preparation

X. Huang, L. Zhang, Z. Wen, H. Chen, S. Li, G. Ji, C.-c. Yin, F. Sun

This paper introduces an amorphous nickel-titanium alloy film as a new supporting substrate for cryoEM, showing improved electron conductivity and reduced beam-induced motion, leading to better particle distribution and resolution.

bioRxiv · Mar 2, 2020Biophysics

VHUT-cryo-FIB, a method to fabricate frozen-hydrated lamella of tissue specimen for in situ cryo-electron tomography

J. Zhang, D. Zhang, L. Sun, G. Ji, X. Huang, T. Niu, F. Sun

The paper introduces VHUT-cryo-FIB, a workflow for preparing frozen-hydrated tissue lamella for cryo-ET, and demonstrates its effectiveness using rat and spinach samples.

bioRxiv · Aug 6, 2019 · PreprintBiophysics

The full-length transcriptome of Spartina alterniflora reveals the complexity of high salt tolerance in monocotyledonous halophyte

W. Ye, T. Wang, W. Wei, S. Lou, F. Lan, S. Zhu, Q. Li, G. Ji, C. Lin, X. Wu, L. Ma

This study uses full-length transcriptome sequencing to analyze salt tolerance mechanisms in Spartina alterniflora and identifies key genes and regulatory networks involved in stress response.

bioRxiv · Jun 24, 2019Plant Biology