Author

H. H. Kong

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 4 Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:clustering· 2 Research Focus:gene regulatory network inference· 2 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

J. A. Segre· 3 shared K. P. Lemon· 3 shared S. Conlan· 3 shared C. Deming· 2 shared P. Joglekar· 2 shared A. A. Aksenov· 1 shared A. C. C. Obawemimo· 1 shared A. L. Byrd· 1 shared

Activity by Year

2019-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

J. A. Segre

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Integrated genomic and functional analyses of human skin-associated Staphylococcus reveals extensive inter- and intra-species diversity

P. Joglekar, S. Conlan, S.-Q. Lee-Lin, C. Deming, S. S. Kashaf, P. Thomas, H. H. Kong, J. Segre

This study characterizes the genomic and functional diversity of skin-associated Staphylococcus species using metagenomic and pan-genome analyses, revealing extensive strain-specific gene variation and functional specialization.

bioRxiv · Jun 22, 2023 · PreprintMicrobiology

Genomic characterization of the C. tuberculostearicum species complex, a ubiquitous member of the human skin microbiome

N. Ahmed, P. Joglekar, C. Deming, NISC Comparative Sequencing Program, K. P. Lemon, H. H. Kong, J. A. Segre, S. Conlan

This paper expands the genomic reference catalog of Corynebacterium species on human skin by sequencing isolates and analyzing metagenomic data, identifying two ribotypes and a potential new species.

bioRxiv · Jun 16, 2023Microbiology

Metabolic capabilities are highly conserved among human nasal-associated Corynebacterium species in pangenomic analyses

T. H. Tran, I. F. Escapa, A. Q. Roberts, W. Gao, A. C. C. Obawemimo, J. A. Segre, H. H. Kong, S. Conlan, M. Kelly, K. P. Lemon

The paper analyzes the metabolic capabilities of four common human nasal Corynebacterium species using pangenomic data, finding high conservation of core metabolic functions across species and geographic strains.

bioRxiv · Jun 5, 2023Microbiology

Cutibacterium acnes antibiotic production shapes niche competition in the human skin microbiome

J. Claesen, J. B. Spagnolo, S. Flores Ramos, K. L. Kurita, A. L. Byrd, A. A. Aksenov, A. V. Melnik, W. R. Wong, S. Wang, R. D. Hernandez, M. S. Donia, P. C. Dorrestein, H. H. Kong, J. A. Segre, R. G. Linington, , K. P. Lemon

The paper identifies cutimycin, an antibiotic produced by Cutibacterium acnes, which reduces Staphylococcus colonization in human skin follicles.

bioRxiv · Mar 30, 2019Microbiology