Author

R. D. Hernandez

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 3 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 4 Approach:statistical model· 3 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. A. Aksenov· 1 shared A. Dahl· 1 shared A. L. Byrd· 1 shared A. V. Melnik· 1 shared C. Pilcher· 1 shared E. K. Fryer· 1 shared H. H. Kong· 1 shared J. A. Segre· 1 shared

Activity by Year

2018-2019 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMicrobiology

A. A. Aksenov

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The genetic interaction between HIV and the antibody repertoire

N. Strauli, E. K. Fryer, O. Pham, M. Abdel-Mohsen, S. N. Facente, C. Pilcher, P. Pennings, S. Pillai, R. D. Hernandez

The paper analyzes HIV and antibody repertoire interactions in longitudinal samples, finding enriched V gene segments in HIV-associated AbR partitions but little evidence of antagonistic coevolution.

bioRxiv · Jun 28, 2019 · PreprintEvolutionary Biology

Ultra-rare variants drive substantial cis-heritability of human gene expression

R. D. Hernandez, L. H. Uricchio, K. Hartman, J. Ye, A. Dahl, N. Zaitlen

This study estimates that ultra-rare variants contribute significantly to cis-heritability of gene expression, with singletons accounting for ~25% and most of that from variants absent in thousands of samples.

bioRxiv · Apr 27, 2019Evolutionary Biology

Cutibacterium acnes antibiotic production shapes niche competition in the human skin microbiome

J. Claesen, J. B. Spagnolo, S. Flores Ramos, K. L. Kurita, A. L. Byrd, A. A. Aksenov, A. V. Melnik, W. R. Wong, S. Wang, R. D. Hernandez, M. S. Donia, P. C. Dorrestein, H. H. Kong, J. A. Segre, R. G. Linington, , K. P. Lemon

The paper identifies cutimycin, an antibiotic produced by Cutibacterium acnes, which reduces Staphylococcus colonization in human skin follicles.

bioRxiv · Mar 30, 2019Microbiology

Human demographic history has amplified the effects of background selection across the genome

R. Torres, Z. A. Szpiech, R. D. Hernandez

The paper investigates how non-equilibrium demographic processes amplify background selection effects on genetic diversity in human populations, showing greater diversity loss in non-African populations.

bioRxiv · Jan 9, 2018Evolutionary Biology