Author

A. A. Aksenov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Organism:human· 2 Assay:metabolomics· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

A. V. Melnik· 3 shared G. Humphrey· 3 shared P. C. Dorrestein· 3 shared A. Gonzalez· 2 shared A. Tripathi· 2 shared C. Marotz· 2 shared D. McDonald· 2 shared G. Ackermann· 2 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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3 shared papersMicrobiology

A. V. Melnik

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Multi-omics profiling of Earth's biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments

J. P. Shaffer, L.-F. Nothias, L. R. Thompson, S. G. Jon, R. A. Salido, S. P. Couvillion, A. D. Brejnrod, S. Huang, F. Lejzerowicz, N. Haiminen, H. L. Lutz, Q. Zhu, C. Martino, J. T. Morton, S. Karthikeyan, , St

The paper performs a multi-omics meta-analysis of microbial and metabolite data from diverse environments, revealing patterns of diversity and co-occurrence across biomes.

bioRxiv · Jun 4, 2021Ecology

Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile Acids

R. A. Quinn, A. Vrbanac, A. V. Melnik, K. A. Patras, M. Christy, A. T. Nelson, A. A. Aksenov, A. Tripathi, G. Humphrey, R. da Silva, R. Bussell, T. Thron, M. Wang, F. Vargas, J. Gauglitz, , P. C. Dorrestein

The paper identifies novel conjugated bile acids produced by the microbiome in mice and humans using mass spectrometry and a murine 3D model.

bioRxiv · Jun 3, 2019 · PreprintMicrobiology

Cutibacterium acnes antibiotic production shapes niche competition in the human skin microbiome

J. Claesen, J. B. Spagnolo, S. Flores Ramos, K. L. Kurita, A. L. Byrd, A. A. Aksenov, A. V. Melnik, W. R. Wong, S. Wang, R. D. Hernandez, M. S. Donia, P. C. Dorrestein, H. H. Kong, J. A. Segre, R. G. Linington, , K. P. Lemon

The paper identifies cutimycin, an antibiotic produced by Cutibacterium acnes, which reduces Staphylococcus colonization in human skin follicles.

bioRxiv · Mar 30, 2019Microbiology

American Gut: an Open Platform for Citizen-Science Microbiome Research

D. McDonald, E. R. Hyde, J. W. Debelius, J. T. Morton, A. Gonzalez, G. Ackermann, A. A. Aksenov, B. Behsaz, C. Brennan, Y. Chen, L. DeRight Goldasicha, P. C. Dorrestein, R. R. Dunn, A. K. Fahimipourg, J. Gaffney, , Rah

The paper uses citizen-science data to analyze human stool microbiomes, revealing new insights into microbial diversity, metabolome composition, and associations with diet and health.

bioRxiv · Mar 7, 2018Microbiology