Author

J. A. White

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 2 Microbiology· 2 Biophysics· 1 Ecology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 6 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

A. M. Streets· 3 shared A. Lai· 2 shared L. C. Rosenwald· 2 shared N. Altemose· 2 shared A. Ingargiola· 1 shared A. L. Hill· 1 shared A. Maslan· 1 shared A. Styer· 1 shared

Activity by Year

2018-2020 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioengineering

A. M. Streets

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Antigen-driven clonal selection shapes the persistence of HIV-1 infected CD4+ T cells in vivo

F. R. Simonetti, H. Zhang, G. P. Soroosh, J. Duan, K. Rhodehouse, A. L. Hill, S. A. Beg, K. McCormick, H. Raymond, C. L. Nobles, J. Everett, K. J. Kwon, J. A. White, J. Lai, J. B. Margolick, , R. F. Siliciano

This study links antigen responsiveness, proviral sequences, integration sites, and TCRβ sequences to show antigen-driven clonal selection maintains HIV-1 persistence in CD4+ T cells.

bioRxiv · Dec 1, 2020Microbiology

Endosymbiotic Rickettsiella causes cytoplasmic incompatibility in a spider host

L. C. Rosenwald, M. I. Sitvarin, J. A. White

This study shows that Rickettsiella, a bacterial endosymbiont, causes cytoplasmic incompatibility in spiders, a phenomenon previously attributed mainly to Wolbachia.

bioRxiv · Mar 3, 2020Ecology

μDamID: a microfluidic approach for imaging and sequencing protein-DNA interactions in single cells

N. Altemose, A. Maslan, A. Lai, J. A. White, A. M. Streets

The paper introduces μDamID, a microfluidic platform that combines imaging and sequencing to study protein-DNA interactions in single cells, revealing 3D chromatin organization and gene regulation patterns.

bioRxiv · Jul 18, 2019Bioengineering

High-throughput smFRET analysis of freely diffusing nucleic acid molecules and associated proteins

M. Segal, A. Ingargiola, E. Lerner, S. Chung, J. A. White, A. M. Streets, S. Weiss, X. Michalet

This paper introduces a high-throughput smFRET method using multispot excitation and SPAD arrays to rapidly analyze nucleic acid and protein conformations and interactions.

bioRxiv · Jun 25, 2019Biophysics

Endosymbiotic bacteria are prevalent and diverse in agricultural spiders

J. A. White, A. Styer, L. C. Rosenwald, M. M. Curry, K. D. Welch, K. J. Athey, E. G. Chapman

The paper investigates endosymbiotic bacteria in agricultural spiders, finding high prevalence and diversity across 14 species, with some individuals hosting multiple symbiont strains.

bioRxiv · Mar 24, 2019Microbiology

On-ratio PDMS bonding for multilayer microfluidic device fabrication

A. Lai, N. Altemose, J. A. White, A. M. Streets

The paper demonstrates that on-ratio PDMS bonding is effective for multilayer soft lithography, avoiding the issues of off-ratio bonding.

bioRxiv · Oct 23, 2018Bioengineering