Author

J. D. Lewis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1 Ecology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

A. Boulanger· 1 shared A. Ishida-Yamamoto· 1 shared A. Kubo· 1 shared A. L. Caldara· 1 shared A. L. Mattheyses· 1 shared A. M. Deutschbauer· 1 shared A. P. Kowalczyk· 1 shared A. S. Frangakis· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperMicrobiology

A. Boulanger

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

The leucine-rich repeat receptor kinase QSK1 is a novel regulator of PRR-RBOHD complex and is employed by the bacterial effector HopF2Pto to modulate plant immunity

Y. Goto, Y. Kadota, M. Mbengue, J. D. Lewis, H. Matsui, N. Maki, J. Sklenar, P. Derbyshire, A. Shibata, Y. Ichihashi, D. Guttman, H. Nakagami, T. Suzuki, F. L. H. Menke, S. Robatzek, , K. Shirasu

The paper identifies QSK1 as a novel negative regulator of PRR-RBOHD complex and shows it is targeted by the bacterial effector HopF2Pto to suppress plant immunity.

bioRxiv · Dec 13, 2023 · PreprintPlant Biology

Targeted Proteomics of Plasma Extracellular Vesicles Uncovers MUC1 as Combinatorial Biomarker for the Early Detection of High-grade Serous Ovarian Cancer

T. T. Cooper, D. Z. Dieters-Castator, J. Liu, G. M. Siegers, L. Veliz, D. Pink, J. D. Lewis, Y. Fu, F. Lagugne-Labarthet, H. Steed, G. A. Lajoie, L. M. Postovit

bioRxiv · Mar 31, 2022Cancer Biology

Genome-wide identification of fitness determinants in the Xanthomonas campestris bacterial pathogen during early stages of plant infection

J. S. Luneau, M. Baudin, T. Quiroz-Monnens, S. Carrere, O. Bouchez, M.-F. Jardinaud, C. Gris, J. Francois, J. Ray, B. Torralba, M. Arlat, J. D. Lewis, A. M. Deutschbauer, E. Lauber, L. D. Noël, A. Boulanger

This study identifies key fitness determinants of Xanthomonas campestris during early plant infection using RB-TnSeq, revealing novel genes involved in adaptation and virulence.

bioRxiv · Feb 7, 2022Microbiology

Assembly of the amphibian microbiome is influenced by the effects of land-use change on environmental reservoirs

E. M. Barnes, S. Kutos, N. Naghshineh, M. Mesko, Q. You, J. D. Lewis

This study examines how land-use changes affect amphibian skin and soil microbiomes, finding that microbial composition varies with environmental factors and suggests both stochastic and deterministic assembly mechanisms.

bioRxiv · Nov 30, 2020Ecology

The Desmosome is a Mesoscale Lipid Raft-Like Membrane Domain

J. D. Lewis, A. L. Caldara, S. E. Zimmer, A. Seybold, N. L. Strong, S. N. Stahley, A. S. Frangakis, I. Levental, J. K. Wahl, A. L. Mattheyses, T. Sasaki, K. Nakabayashi, K. Hata, Y. Matsubara, A. Ishida-Yamamoto, , A. P. Kowalczyk

The paper identifies a mutation in the desmoglein TMD that disrupts lipid raft association and desmosome formation, revealing a mesoscale lipid raft-like domain in desmosomes.

bioRxiv · Oct 15, 2018Cell Biology