Author

J. Krill-Burger

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Tsherniak· 2 shared F. Vazquez· 2 shared J. M. Dempster· 2 shared J. S. Boehm· 2 shared A. Warren· 1 shared C. M. Beaver· 1 shared C. Pacini· 1 shared D. E. Root· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersCancer Biology

A. Tsherniak

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2 papers

Recent·Most cited

Gene expression has more power for predicting in vitro cancer cell vulnerabilities than genomics

J. M. Dempster, J. Krill-Burger, A. Warren, J. McFarland, J. S. Boehm, F. Vazquez, W. Hahn, T. Golub, A. Tsherniak

This study compares DNA- and expression-based models for predicting cancer cell viability and finds expression models are more accurate and interpretable.

bioRxiv · Feb 21, 2020 · PreprintCancer Biology

Agreement between two large pan-cancer CRISPR-Cas9 gene dependency datasets

J. M. Dempster, C. Pacini, S. Pantel, F. M. Behan, T. Green, J. Krill-Burger, C. M. Beaver, S. T. Younger, V. Zhivich, H. Najgebauer, F. Allen, E. Goncalves, R. Shepherd, J. G. Doench, K. Yusa, , A. Tsherniak

This study compares two large pan-cancer CRISPR-Cas9 screens, finding high concordance in gene dependencies despite differences in protocols and reagents.

bioRxiv · Jun 4, 2019Cancer Biology