Author

J. Uchiyama

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell signaling & trafficking· 3 Organism:human· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

K. Imami· 2 shared Y. Ishihama· 2 shared A. Coluccio· 1 shared A. J. Robinson· 1 shared A. Joyce· 1 shared A. Nemudryi· 1 shared B. Wiedenheft· 1 shared C. D. de Mattos· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBiochemistry

K. Imami

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Bacterial threat assessment of bacteriophage infection is mediated by intracellular polyamine accumulation and Gac/Rsm signaling

C. D. de Mattos, A. Nemudryi, D. Faith, D. C. Bublitz, L. Hammond, M. Kinnersley, C. M. Schwartzkopf, A. J. Robinson, A. Joyce, L. A. Michaels, R. Brzozowski, A. Coluccio, D. Xing, J. Uchiyama, L. K. Jennings, , P. R. Secor

This study shows that Pseudomonas aeruginosa uses intracellular polyamine accumulation and Gac/Rsm signaling to assess bacterial cell death and inhibit phage replication.

bioRxiv · Apr 1, 2022Microbiology

pSNAP: Proteome-wide analysis of elongating nascent polypeptide chains

J. Uchiyama, R. Roy, D. O. Wang, K. Morikawa, Y. Kawahara, M. Iwasaki, C. Yoshino, Y. Mishima, Y. Ishihama, K. Imami

pSNAP profiles proteome-wide elongating nascent polypeptide chains, revealing translational repression and modification effects on ribosome-associated interactions.

bioRxiv · Sep 22, 2021Biochemistry

Quantitative nascent proteome profiling by dual pulse labeling with O-propargyl-puromycin and stable isotope labeled amino acids

J. Uchiyama, Y. Ishihama, K. Imami

This paper introduces a method to accurately quantify nascent proteins by dual pulse labeling with OPP and stable isotope labeled amino acids, revealing repression of specific proteins upon transcription inhibition.

bioRxiv · Jun 6, 2020Biochemistry

Potential Application of Bacteriophages in Enrichment Culture for Improved Prenatal Streptococcus agalactiae Screening

J. Uchiyama, H. Matsui, H. Murakami, S.-i. Kato, N. Watanabe, T. Nasukawa, K. Mizukami, M. Ogata, M. Sakaguchi, S. Matsuzaki, H. Hanaki

This study tests using bacteriophages to reduce false negatives in S. agalactiae screening by inhibiting E. faecalis growth in enrichment cultures.

bioRxiv · Aug 3, 2018Microbiology