Author

Katherine Licon

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Trey E. IdekeriD· 2 shared Adriana PiteaiD· 1 shared Andrew Nathanael SheniD· 1 shared Anna BäckströmiD· 1 shared Brenton P. Munson· 1 shared Casper F. WinsnesiD· 1 shared Denis L. J. LafontaineiD· 1 shared Edward L. HuttliniD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Trey E. IdekerORCID

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Author profile →

2 papers

Recent·Most cited

Medea: An AI agent for therapeutic reasoning across biological contexts

Pengwei Sui, Michelle M. Li, Brenton P. Munson, Shanghua Gao, Wanxiang Shen, Valentina Giunchiglia, Andrew Nathanael Shen, Yepeng Huang, Zhenglun Kong, Katherine Licon, Trey E. Ideker, Marinka Žitnik

Medea, an AI agent, performs therapeutic reasoning across biological contexts by preserving context, verifying steps, and reconciling evidence, outperforming existing models in multiple domains.

bioRxiv · Jul 17, 2026 · PreprintBioinformatics

Mapping cell structure across scales by fusing protein images and interactions

Yue Qin, Edward L. Huttlin, Casper F. Winsnes, Maya L. Gosztyla, Ludivine Wacheul, Marcus R. Kelly, Steven M. Blue, Fan Zheng, Michael Chen, Leah V. Schaffer, Katherine Licon, Anna Bäckström, Laura Pontano Vaites, John J. Y. Lee, Wei Ouyang, , Trey E. Ideker

The paper integrates protein imaging and interaction data to create a unified map of eukaryotic cell structure, revealing new subcellular systems and protein associations.

Nature · Nov 24, 2021Peer-reviewedSystems Biology