Author

Lori Cuyugan

Translational Genomics Research Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Jonathan R. Adkins· 3 shared Winnie S. LiangiD· 3 shared Sara NasseriD· 2 shared Adrienne HellandiD· 1 shared Ahmet A. Kurdoglu· 1 shared Ajai ChariiD· 1 shared Alex Blanski· 1 shared Andrea Donnelly· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersGenetic & Genomic Medicine

Jonathan R. Adkins

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Author profile →

3 papers

Recent·Most cited

Genomic Basis of Multiple Myeloma Subtypes from the MMRF CoMMpass Study

Sheri Skerget, Daniel Peñaherrera, Ajai Chari, Sundar Jagannath, David Samuel DiCapua Siegel, Ravi Vij, Gregory Joshua Orloff, Andrzej J. Jakubowiak, Rubén Niesvizky, Darla Liles, Jesús G. Berdeja, Moshe Yair Levy, Jeffrey Lee Wolf, Saad Z. Usmani, The MMRF CoMMpass Network, , Jonathan J. Keats

The paper identifies genomic subtypes of multiple myeloma using the MMRF CoMMpass study and finds that 25.5% of patients transition to a high-risk expression subtype at progression, which expresses immunotherapy targets.

medRxiv · Aug 2, 2021 · PreprintGenetic & Genomic Medicine

Tumor cell phenotype and heterogeneity differences in IDH1 mutant vs wild-type gliomas

Michael E. Berens, Anup Sood, Jill S. Barnholtz‐Sloan, John F. Graf, Sanghee Cho, Seungchan Kim, Jeffrey Kiefer, Sara Ann Byron, Rebecca F. Halperin, Sara Nasser, Jonathan R. Adkins, Lori Cuyugan, Karen Devine, Quinn T. Ostrom, Marta Couce, , Fiona Ginty

This study compares tumor cell phenotype and heterogeneity differences between IDH1 mutant and wild-type gliomas using integrated multi-omics data.

PLoS ONE · Dec 27, 2019Peer-reviewedGenomics

Circular RNA expression and regulatory network prediction in posterior cingulate astrocytes in elderly subjects

Shobana Sekar, Lori Cuyugan, Jonathan R. Adkins, Philipp A. Geiger, Winnie S. Liang

The paper identifies circRNAs and their regulatory networks in posterior cingulate astrocytes from elderly subjects, finding enriched immune response pathways.

BMC Genomics · May 8, 2018Peer-reviewedNeuroscience