Author

M. S. Schechter

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Research Focus:cell type annotation· 3 Organism:human· 3 Approach:deep learning· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1

Frequent Co-Authors

A. M. Eren· 5 shared A. Fernandez-Guerra· 3 shared C. Vanni· 3 shared A. D. Willis· 2 shared E. C. Fogarty· 2 shared I. Veseli· 2 shared M. K. Yu· 2 shared M. Steinegger· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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5 shared papersMicrobiology

A. M. Eren

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Author profile →

5 papers

Recent·Most cited

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

I. Veseli, Y. T. Chen, M. S. Schechter, C. Vanni, E. C. Fogarty, A. R. Watson, B. A. Jabri, R. Blekhman, A. D. Willis, M. K. Yu, A. Fernandez-Guerra, J. Fussel, A. M. Eren

The paper identifies high metabolic independence as a marker of gut microbiome changes in IBD, using a software framework to analyze metagenomic data from healthy and IBD patients.

bioRxiv · May 10, 2023Microbiology

A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut

E. C. Fogarty, M. S. Schechter, K. Lolans, M. L. Sheahan, I. Veseli, R. Moore, E. Kiefl, T. Moody, P. A. Rice, M. K. Yu, M. Mimee, E. B. Chang, S. L. McLellan, A. D. Willis, L. E. Comstock, A. M. Eren

The paper identifies a highly prevalent cryptic plasmid in the human gut that is more numerous than crAssphage and has potential applications in detecting fecal contamination and inflammatory states.

bioRxiv · Mar 25, 2023 · PreprintMicrobiology

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

A. S. Little, I. T. Younker, M. S. Schechter, P. Nol Bernardino, R. Meheust, J. Stemczynski, K. Scorza, M. W. Mullowney, D. Sharan, E. Waligurski, R. Smith, R. Ramanswamy, W. Leiter, D. Moran, M. McMillin, , S. H. Light

The paper identifies gut bacteria that use dietary and host-derived metabolites as electron acceptors in anaerobic respiration, revealing new metabolic pathways and reductase evolution.

bioRxiv · Dec 26, 2022Microbiology

AGNOSTOS-DB: a resource to unlock the uncharted regions of the coding sequence space

C. Vanni, M. S. Schechter, T. O. Delmont, A. M. Eren, M. Steinegger, F. O. Gloeckner, A. Fernandez-Guerra

AGNOSTOS-DB is a database that integrates known and unknown coding sequences from genomes and metagenomes to enhance understanding of genes of unknown function.

bioRxiv · Jun 7, 2021 · PreprintMicrobiology

Unifying the known and unknown microbial coding sequence space

C. Vanni, M. S. Schechter, S. Acinas, A. Barberan, P. L. Buttigieg, E. O. Casamayor, T. O. Delmont, C. M. Duarte, A. M. Eren, R. D. Finn, R. Kottmann, A. Mitchell, P. Sanchez, K. Siren, M. Steinegger, , A. Fernandez-Guerra

The paper presents a framework and workflow to integrate genes of unknown function into genomic analysis, quantifying their diversity and relevance across biomes and providing a resource for studying Cand. Patescibacteria.

bioRxiv · Jun 30, 2020Microbiology