Author

E. Kiefl

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 3 Research Focus:chromatin & epigenetic regulation· 2 Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

A. M. Eren· 4 shared A. D. Willis· 2 shared E. B. Chang· 2 shared M. S. Rappe· 2 shared O. C. Esen· 2 shared T. O. Delmont· 2 shared A. Sakatani· 1 shared C. Cham· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersMicrobiology

A. M. Eren

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut

E. C. Fogarty, M. S. Schechter, K. Lolans, M. L. Sheahan, I. Veseli, R. Moore, E. Kiefl, T. Moody, P. A. Rice, M. K. Yu, M. Mimee, E. B. Chang, S. L. McLellan, A. D. Willis, L. E. Comstock, A. M. Eren

The paper identifies a highly prevalent cryptic plasmid in the human gut that is more numerous than crAssphage and has potential applications in detecting fecal contamination and inflammatory states.

bioRxiv · Mar 25, 2023 · PreprintMicrobiology

Structure-informed microbial population genetics elucidate selective pressures that shape protein evolution

E. Kiefl, O. C. Esen, S. E. Miller, K. L. Kroll, A. D. Willis, M. S. Rappe, T. Pan, A. M. Eren

The paper uses structure-informed metagenomic analysis to study evolutionary pressures in a marine microbial population, revealing links between protein structure, selective pressures, and environmental factors.

bioRxiv · Mar 2, 2022Microbiology

Early-life microbial intervention reduces colitis risk promoted by antibiotic-induced gut dysbiosis

J. Miyoshi, S. Miyoshi, T. O. Delmont, C. Cham, S. T. M. Lee, A. Sakatani, K. Yang, Y. Shan, E. Kiefl, M. Yousef, S. Crosson, M. Sogin, D. A. Antonopoulos, A. M. Eren, V. Leone, E. B. Chang

The paper shows that adding a specific Bacteroides strain early in life reduces colitis risk in genetically susceptible mice with antibiotic-induced gut dysbiosis.

Gastroenterology · Sep 1, 2021Peer-reviewedMicrobiology

The global biogeography of amino acid variants within a single SAR11 population is governed by natural selection

T. O. Delmont, E. Kiefl, O. Kilinc, O. C. Esen, I. Uysal, M. S. Rappe, S. Giovannoni, A. M. Eren

The paper analyzes amino acid variants in a SAR11 population to show natural selection drives genomic diversity across oceanic regions.

bioRxiv · Jul 31, 2017Microbiology