Author

Mayuresh Mujumdar

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:protein sequence· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Gene Wei-Ming YeoiD· 2 shared Joshua AhdoutiD· 2 shared Katherine L. RothameliD· 2 shared Kristopher W. BrannaniD· 2 shared Wenhao JiniD· 2 shared Ahmed A. Abdou· 1 shared Assael A. MadrigaliD· 1 shared Benjamin J. BokoriD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersSystems Biology

Gene Wei-Ming YeoORCID

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2 papers

Recent·Most cited

Large-scale map of RNA binding protein interactomes across the mRNA life-cycle

Lena Annika Street, Katherine L. Rothamel, Kristopher W. Brannan, Wenhao Jin, Benjamin J. Bokor, Kevin D. Dong, Kevin Rhine, Assael A. Madrigal, Norah Al-Azzam, Jenny Kim Kim, Yanzhe Ma, Darvesh Gorhe, Ahmed A. Abdou, Erica Wolin, Orel Mizrahi, , Gene Wei-Ming Yeo

The paper constructs an RNA-aware RBP-centric PPI map across the mRNA life-cycle, revealing 20,359 novel interactions and showing 73% are RNA-dependent.

Molecular Cell · Sep 19, 2024Peer-reviewedSystems Biology

HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence

Wenhao Jin, Kristopher W. Brannan, Katannya Kapeli, Samuel S. Park, Hui Qing Tan, Maya L. Gosztyla, Mayuresh Mujumdar, Joshua Ahdout, Bryce Henroid, Katherine L. Rothamel, Joy S. Xiang, Limsoon Wong, Gene Wei-Ming Yeo

HydRA predicts RNA-binding capacity using protein interaction and sequence data, identifying novel RNA-binding domains with high specificity and sensitivity.

Molecular Cell · Jul 1, 2023Peer-reviewedBioinformatics