Author

O. Kalyuzhniy

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

W. R. Schief· 3 shared M. Kubitz· 2 shared X. Hu· 2 shared Y. Adachi· 2 shared A. Barbieri· 1 shared A. C. Williams· 1 shared A. Liguori· 1 shared A. Palser· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersImmunology

W. R. Schief

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Author profile →

3 papers

Recent·Most cited

ImmunologybioRxivPreprintJan 22, 2024

Diverse competitor B cell responses to a germline-targeting priming immunogen in human Ig loci transgenic mice

T. Schiffner, A. Palser, J. G. Jardine…·W. R. Schief

The paper analyzes B cell responses to a germline-targeting immunogen in human Ig loci transgenic mice, finding diverse non-VRC01-class B cells and competitor B cells recognizing epitopes near the VRC01 epitope.

DOI 10.1101/2024.01.22.575410

mouseCITE-seq

𝕏 PostBluesky

ImmunologyProceedings of the National Academy of SciencesPeer-reviewedDec 27, 2022

Humanized V(D)J-rearranging and TdT-expressing Mouse Vaccine Models with Physiological HIV-1 Broadly Neutralizing Antibody Precursors

S. Luo, C. Jing, A. Y. Ye…·F. W. Alt

This paper introduces new mouse models expressing human HIV-1 broadly neutralizing antibody (bnAb) precursors with more physiological levels and diversity, enhancing vaccine research for bnAb elicitation.

DOI 10.1073/pnas.2217883120

mouseproteomics

𝕏 PostBluesky

BioengineeringbioRxivApr 12, 2018

RosettaAntibodyDesign (RAbD): A General Framework for Computational Antibody Design

J. Adolf-Bryfogle, O. Kalyuzhniy, M. Kubitz…·R. L. Dunbrack

This paper introduces RosettaAntibodyDesign (RAbD), a computational framework for antibody design that improves affinity by redesigning CDRs using structural and sequence-based methods.

DOI 10.1371/journal.pcbi.1006112

protein structuredeep learning

𝕏 PostBluesky