Author

Paul Peluso

Pacific Biosciences (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:genome assembly· 3 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Organism:Drosophila· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Chen-Shan ChiniD· 3 shared Fritz Joachim SedlazeckiD· 2 shared Abraham Morales-Cruz· 1 shared Adam M Phillippy· 1 shared Alicia Clum· 1 shared Andrew W. CarrolliD· 1 shared Anthony Schmitt· 1 shared Arkarachai FungtammasaniD· 1 shared

Activity by Year

2014-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersBioinformatics

Chen-Shan ChinORCID

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3 papers

Recent·Most cited

Accurate chromosome-scale haplotype-resolved assembly of human genomes

Shilpa Garg, Arkarachai Fungtammasan, Andrew W. Carroll, Mike Chou, Anthony Schmitt, Xiang Zhou, Stephen Mac, Paul Peluso, Emily Hatas, Jay Ghurye, Jared Maguire, Medhat Mahmoud, Haoyu Cheng, David Heller, Justin M. Zook, , Heng Li

This paper introduces a method for chromosome-scale haplotype-resolved genome assembly using long reads and long-range data, achieving high accuracy and contiguity in three human genomes.

bioRxiv · Jul 1, 2020 · PreprintBioinformatics

Phased Diploid Genome Assembly with Single Molecule Real-Time Sequencing

Chen-Shan Chin, Paul Peluso, Fritz J. Sedlazeck, Maria Nattestad, Gregory T. Concepcion, Alicia Clum, Christopher Dunn, Ronan O'Malley, Rosa Figueroa-Balderas, Abraham Morales-Cruz, Grant R. Cramer, Massimo Delledonne, Chongyuan Luo, Joseph R. Ecker, Dario Cantu, , Michael C. Schatz

This paper introduces FALCON and FALCON-Unzip algorithms to assemble diploid genomes from SMRT sequencing data, demonstrating improved contiguity and phasing compared to short-read methods.

bioRxiv · Jun 3, 2016Bioinformatics

Long-read, whole genome shotgun sequence data for five model organisms

Kristi E Kim, Paul Peluso, Primo Baybayan, Patricia Jane Yeadon, Charles Yu, William Fisher, Chen-Shan Chin, Nicole A Rapicavoli, David R Rank, Joachim Li, David Catcheside, Susan E Celniker, Adam M Phillippy, Casey M Bergman, Jane M Landolin

The paper provides high-coverage SMRT sequencing datasets for five model organisms to support genome assembly and analysis.

bioRxiv · Oct 23, 2014Genomics