Author

S. Farmer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Cancer Biology· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:metagenomics· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1

Frequent Co-Authors

K. Cantrell· 2 shared R. Knight· 2 shared A. Bartko· 1 shared A. Bedard· 1 shared A. Birbrair· 1 shared A. Emili· 1 shared A. Gonzalez· 1 shared A. Guilherme· 1 shared

Activity by Year

2018-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersMicrobiology

K. Cantrell

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Effects of Variation in Urine Sample Storage Conditions on 16S Urogenital Microbiome Analyses

T. Kumar, M. Bryant, K. Cantrell, S. J. Song, D. McDonald, H. M. Tubb, S. Farmer, E. S. Lukacz, L. Brubaker, R. Knight

This study evaluates how urine sample storage conditions affect 16S rRNA gene sequencing results, finding that AssayAssure reduces microbial bias at colder temperatures but not significantly compared to no preservative.

bioRxiv · Jul 5, 2022Microbiology

Bacterial metatranscriptomes in wastewater can differentiate virally infected human populations

R. A. Salido, C. Martino, S. Karthikeyan, S. Huang, G. Rahman, A. Gonzalez, L. S. Zaramela, K. L. Beck, S. Bhute, K. Cantrell, A. P. Carrieri, S. Farmer, N. Haiminen, G. Humphrey, H.-C. Kim, , R. Knight

The paper shows that bacterial metatranscriptomes in wastewater can distinguish SARS-CoV-2 infected from uninfected human populations without directly detecting viral transcripts.

bioRxiv · Feb 23, 2022 · PreprintMicrobiology

Triphenyl phosphate is a selective PPARγ modulator that does not induce brite adipogenesis in vitro and in vivo

S. Kim, N. Rabhi, B. C. Blum, R. Hekman, K. Wynne, A. Emili, S. Farmer, J. J. Schlezinger

bioRxiv · Jan 31, 2020Pharmacology & Toxicology

Toll-Like Receptor-4 Disruption Suppresses Adipose Tissue Remodeling and Increases Survival During Cancer Cachexia Syndrome

F. Henriques, M. Lopes, F. Franco, P. Knobl, K. Santos, L. Bueno, V. Correa, A. Bedard, A. Guilherme, A. Birbrair, S. Peres, S. Farmer, M. L. Batista

This study shows that disrupting TLR4 reduces adipose tissue remodeling and improves survival in cancer cachexia by inhibiting inflammation and macrophage infiltration.

bioRxiv · Aug 25, 2018Cancer Biology