Author

S. Girardin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Bioengineering· 1 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

J. Voros· 2 shared S. J. Ihle· 2 shared A. Bonnin· 1 shared A. M. Reichmuth· 1 shared A. Mortha· 1 shared A. Ranger· 1 shared B. Maurer· 1 shared C. F. Harrigan· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCell Biology

J. Voros

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A modular and flexible open source cell incubator system for mobile and stationary use

J. Duru, B. Maurer, T. Ruff, J. Hengsteler, S. Girardin, J. Voros, S. J. Ihle

The paper introduces a modular and flexible open-source cell incubator system for both mobile and stationary use, enabling customized incubation for diverse experimental needs.

bioRxiv · Mar 27, 2024Cell Biology

Bacterial ADP-heptose initiates a revival stem cell program in the intestinal epithelium

S. Goyal, C. X. Guo, A. Ranger, D. K. Tsang, O. Singh, C. F. Harrigan, O. Zaslaver, H. Rost, H. Y. Gaisano, S. Yuzwa, N. Gao, J. L. Wrana, D. J. Philpott, S. D. Gray-Owen, S. Girardin

This study shows that bacterial ADP-heptose triggers a revival stem cell program in the intestinal epithelium by inducing Paneth cell dedifferentiation and ISC loss.

bioRxiv · Jan 15, 2024 · PreprintCell Biology

NLRP1B and NLRP3 control the host response following colonization by the commensal protist Tritrichomonas musculis.

P. Chiaranunt, K. Burrows, L. Ngai, E. Y. Cao, H. Liang, C. J. Streuker, S. Girardin, A. Mortha

This study shows that NLRP1B and NLRP3 inflammasomes are required for the host immune response to the commensal protist Tritrichomonas musculis, which protects against Salmonella infections.

bioRxiv · Aug 14, 2021Immunology

UDCT: Unsupervised data to content transformation with histogram-matching cycle-consistent generative adversarial networks

S. J. Ihle, A. M. Reichmuth, S. Girardin, H. Han, F. Stauffer, A. Bonnin, M. F. M. Stampanoni, J. Voros, C. Forro

This paper introduces an unsupervised image segmentation method using cycleGAN-inspired techniques and benchmarks it against a supervised network on cell-counting tasks.

bioRxiv · Mar 1, 2019Bioengineering