Author

S. P. Choksi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:development & morphogenesis· 1 Assay:flow cytometry· 1 Organism:mouse· 1

Frequent Co-Authors

J. F. Reiter· 2 shared A. Tajima· 1 shared A. Yang· 1 shared C. Lee· 1 shared C. Werner· 1 shared D. Cheng· 1 shared D. I. Sun· 1 shared D. J. Erle· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersEvolutionary Biology

J. F. Reiter

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Author profile →

3 papers

Recent·Most cited

An RFX transcription factor regulated ciliogenesis in the progenitors of choanoflagellates and animals

M. Coyle, A. Tajima, F. Leon, S. P. Choksi, A. Yang, S. Espinoza, T. R. Hughes, J. F. Reiter, D. S. Booth, N. King

This study investigates the role of RFX transcription factors in ciliogenesis in choanoflagellates and animals, finding that the RFX/FoxJ1 module predates animal divergence and regulates ciliary gene expression.

bioRxiv · Nov 11, 2022 · PreprintEvolutionary Biology

Flow cytometric analysis and purification of airway epithelial cell subsets

L. R. Bonser, K. D. Koh, K. Johansson, S. P. Choksi, D. Cheng, L. Liu, D. I. Sun, L. T. Zlock, W. L. Eckalbar, W. E. Finkbeiner, D. J. Erle

The paper develops flow cytometric panels to isolate human airway epithelial subsets using scRNA-seq data and cell type markers, identifying subpopulations and low-abundance transcripts in secretory cells.

bioRxiv · Apr 20, 2020Cell Biology

Evolutionary proteomics uncovers ciliary signaling components

M. A. Sigg, T. Menchen, J. Johnson, C. Lee, S. P. Choksi, G. Garcia, H. Busengdal, G. Dougherty, P. Pennekamp, C. Werner, F. Rentzsch, N. Krogan, J. B. Wallingford, H. Omran, J. F. Reiter

The paper uses proteomic analysis of cilia from diverse organisms to identify conserved ciliary proteins and their ancient signaling connections, revealing a novel protein involved in vertebrate development and human disease.

bioRxiv · Jun 22, 2017Evolutionary Biology