Author

S.-i. Nakayama

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

M. Ohnishi· 2 shared A. C. Sena· 1 shared A. Haynes· 1 shared A. Hirabayashi· 1 shared A. L. Greninger· 1 shared A. Rompalo· 1 shared B. Chung· 1 shared B. Yang· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

M. Ohnishi

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2 papers

Recent·Most cited

High-throughput nanopore sequencing of Treponema pallidum tandem repeat genes arp and tp0470 reveals clade-specific patterns and recapitulates global whole genome phylogeny

N. A. P. Lieberman, T. D. Armstrong, B. Chung, D. Pfalmer, C. M. Hennelly, A. Haynes, E. Romeis, Q.-Q. Wang, R.-L. Zhang, C.-X. Kou, G. Ciccarese, I. Dal Conte, M. Cusini, F. Drago, S.-i. Nakayama, , A. L. Greninger

The paper uses nanopore sequencing to analyze repeat regions in T. pallidum genes, revealing clade-specific patterns that align with whole genome phylogeny.

bioRxiv · Aug 2, 2022Microbiology

Emergence and evolution of antimicrobial resistance genes and mutations in Neisseria gonorrhoeae

K. Yahara, K. C. Ma, T. D. Mortimer, K. Shimuta, S.-i. Nakayama, A. Hirabayashi, M. Suzuki, M. Jinnai, H. Ohya, T. Kuroki, Y. Watanabe, M. Yasuda, T. Deguchi, V. Eldholm, O. B. Harrison, , M. Ohnishi

This study traces the emergence and spread of antimicrobial resistance in Neisseria gonorrhoeae by analyzing genome sequences from multiple countries and time periods, revealing recombination events and antibiotic-driven mutations.

bioRxiv · Oct 26, 2020Microbiology