Author

Shruti Malu

Immunitas Therapeutics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Adrienne LuomaiD· 1 shared Asaf RotemiD· 1 shared Aviv RegeviD· 1 shared Benjamin IzariD· 1 shared Brian ClearyiD· 1 shared Bruce Evan JohnsoniD· 1 shared Casey R. AgeriD· 1 shared Chantale BernatcheziD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenomics

Adrienne LuomaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Monkeybread: A Python toolkit for the analysis of cellular niches in single-cell resolution spatial transcriptomics data

Matthew N. Bernstein, Dillon Scott, Cynthia C. Hession, Tim O. Nieuwenhuis, Jacqueline S. Gerritsen, Siamak Tabrizi, Vandana Nandivada, Matthew A. Huggins, Meixue Duan, Shruti Malu, Ming Tang

Monkeybread identifies cellular niches in spatial transcriptomics data, revealing immunogenic and tolerogenic macrophage populations in melanoma tumors.

bioRxiv · Sep 14, 2023 · PreprintBioinformatics

Multi-modal pooled Perturb-CITE-Seq screens in patient models define novel mechanisms of cancer immune evasion

Chris J. Frangieh, Johannes C. Melms, Pratiksha I. Thakore, Kathryn R. Geiger-Schuller, Patricia Ho, Adrienne Luoma, Brian Cleary, Livnat Jerby‐Arnon, Shruti Malu, Michael S. Cuoco, Maryann Zhao, Casey R. Ager, Meri Rogava, Lila Hovey, Asaf Rotem, , Benjamin Izar

The paper uses Perturb-CITE-Seq to identify novel immune evasion mechanisms in cancer by analyzing multi-modal single-cell data from patient-derived models.

Nature Genetics · Mar 1, 2021Peer-reviewedGenomics