Author

Sonalisa Pandey

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Debashis SahooiD· 3 shared Abhineet Sharma· 1 shared Amir HorowitziD· 1 shared Amit ChatterjeeiD· 1 shared Bud MishraiD· 1 shared Haocheng YuiD· 1 shared Karen K.L. MestaniD· 1 shared Lawrence S. PrinceiD· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersSystems Biology

Debashis SahooORCID

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3 papers

Recent·Most cited

Macrophage Polarizations in the Placenta and Lung are Associated with Bronchopulmonary Dysplasia

Karen K.L. Mestan, Abhineet Sharma, Sarah Lazar, Sonalisa Pandey, Mana M. Parast, Louise Chang Laurent, Lawrence S. Prince, Debashis Sahoo

This study investigates the relationship between placental and lung macrophage polarization and their role in the development of bronchopulmonary dysplasia.

bioRxiv · Jan 26, 2024 · PreprintSystems Biology

C1QA is an invariant biomarker for tissue macrophages

Amir Horowitz, Haocheng Yu, Sonalisa Pandey, Bud Mishra, Debashis Sahoo

This study identifies C1QA as a consistent biomarker for tissue macrophages and explores its role in anti-microbial pathways.

bioRxiv · Jan 26, 2024 · PreprintSystems Biology

Invariant Differential Expression Analysis Reveals Mechanism of Cancer Resistance to Cell Cycle Inhibitors

Amit Chatterjee, Sonalisa Pandey, Ravikanth Danda, R. Ranjith Kumar, S. Uma Maheswari, Vikas Khetan, Pukhraj Rishi, Sundara Ramaprabhu, Sailaja V Elchuri, Debashis Sahoo

The paper introduces iDEA, a method to improve differential expression analysis in cancer, revealing mechanisms of resistance to cell cycle inhibitors in retinoblastoma.

bioRxiv · Feb 17, 2021 · PreprintSystems Biology