Author

Amit Chatterjee

Sankara NethralayaORCID 0000-0001-6233-5357Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:drug response / drug discovery· 2 Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Organism:multiple species· 1

Frequent Co-Authors

Alison M. HefferiD· 1 shared Anthony L. CookiD· 1 shared Chad A. GallowayiD· 1 shared Danielle S. W. BenoitiD· 1 shared Debashis SahooiD· 1 shared Edward Howard SchuchmaniD· 1 shared Janet A. H. Tang· 1 shared Jennifer J. HunteriD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperNeuroscience

Alison M. HefferORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintJul 10, 2025

A 3D iPSC retina model reveals non-cell-autonomous and non-neuronal mechanism of photoreceptor degeneration in a lysosomal storage disorder.

Jimin Han, Nathaniel Foley, Sonal Dalvi…·Ruchira Singh

This study uses a 3D iPSC retina model to show that acid ceramidase deficiency causes sphingolipid metabolism changes and photoreceptor degeneration in CLN3 disease, with therapeutic potential for rhAC.

DOI 10.1101/2025.07.10.664233

humanmultiple species

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Systems BiologybioRxivPreprintFeb 17, 2021

Invariant Differential Expression Analysis Reveals Mechanism of Cancer Resistance to Cell Cycle Inhibitors

Amit Chatterjee, Sonalisa Pandey, Ravikanth Danda…·Debashis Sahoo

The paper introduces iDEA, a method to improve differential expression analysis in cancer, revealing mechanisms of resistance to cell cycle inhibitors in retinoblastoma.

DOI 10.1101/2021.02.17.431607

humanbulk RNA-seq

𝕏 PostBluesky