Author

T. Naake

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Biochemistry· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:metabolomics· 3 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

A. Dugourd· 2 shared A. R. Fernie· 2 shared G. Kliewer· 2 shared G. Poschet· 2 shared J. Krijgsveld· 2 shared J. Saez-Rodriguez· 2 shared R. Hell· 2 shared T. Mueller· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersCancer Biology

A. Dugourd

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A single-sample workflow for joint metabolomic and proteomic analysis of clinical specimens

H. Gegner, T. Naake, K. Aljakouch, A. Dugourd, G. Kliewer, T. Mueller, D. Schilling, M. A. Schneider, N. Kunze, T. G. P. Gruenewald, R. Hell, J. Saez-Rodriguez, W. Huber, G. Poschet, J. Krijgsveld

The paper introduces a single-sample workflow, MTBE-SP3, for simultaneous proteomic and metabolomic analysis, showing it reduces technical variation and enables consistent results across biological matrices.

bioRxiv · Nov 7, 2023 · PreprintCancer Biology

Genome-wide association studies of seed metabolites identify loci controlling specialized metabolites in Arabidopsis thaliana

T. Naake, F. Scossa, L. Perez de Souza, M. Borghi, Y. Brotman, T. Mori, R. Nakabayashi, T. Tohge, A. R. Fernie

This study uses GWAS and QTL mapping to identify genetic loci controlling specialized metabolites in Arabidopsis thaliana seeds.

bioRxiv · Sep 23, 2022 · PreprintPlant Biology

Pre-analytical processing of plasma and serum samples for combined proteome and metabolome analysis

H. M. Gegner, T. Naake, A. Dugourd, T. Mueller, F. Czernilofsky, G. Kliewer, E. Jaeger, B. Helm, N. Kunze-Rohrbach, U. Klingmueller, C. Hopf, C. Mueller-Tidow, S. Dietrich, J. Saez-Rodriguez, W. Huber, , J. Krijgsveld

This study evaluates pre-analytical factors affecting plasma and serum proteome and metabolome stability, recommending standardized protocols for clinical use.

bioRxiv · Apr 26, 2022Biochemistry

Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily

T. Naake, H. A. Maeda, S. Proost, T. Takayuki, A. R. Fernie

This study analyzes the evolution of type III polyketide synthases across the green lineage using phylogenomic and synteny analyses of 126 species.

bioRxiv · Apr 28, 2020Plant Biology