Author

Wan Rou Yang

Johns Hopkins University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Kathleen H. BurnsiD· 2 shared Adam D. EwingiD· 1 shared Branavy Irayanar· 1 shared Clarissa N. PacynaiD· 1 shared Daniel ArdeljaniD· 1 shared Darren TayloriD· 1 shared Francisco Jose Sanchez-LuqueiD· 1 shared Gabriella FicziD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenetics

Kathleen H. BurnsORCID

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2 papers

Recent·Most cited

Vitamin C activates young LINE-1 elements in mouse embryonic stem cells via H3K9me3 demethylation

Kevin C.L. Cheng, Jennifer M. Frost, Francisco Jose Sanchez-Luque, Marta García-Cañadas, Darren Taylor, Wan Rou Yang, Branavy Irayanar, Swetha Sampath, Hemalvi Patani, Karl Agger, Kristian Helin, Gabriella Ficz, Kathleen H. Burns, Adam D. Ewing, Jose Luis Garcia-Perez, Miguel Ramos Branco

This study shows that vitamin C increases young LINE-1 element expression in mouse ESCs through H3K9me3 demethylation by KDM4A/C, without increasing somatic insertion rates.

Epigenetics & Chromatin · Oct 16, 2023Peer-reviewedGenetics

SQuIRE: Software for Quantifying Interspersed Repeat Elements

Wan Rou Yang, Daniel Ardeljan, Clarissa N. Pacyna, Lindsay M. Payer, Kathleen H. Burns

SQuIRE quantifies interspersed repeat elements in RNA-seq data by integrating alignment, annotation, and expression analysis tools.

bioRxiv · May 4, 2018 · PreprintBioinformatics