Author

Yijie Liu

Northwestern UniversityPrimary ORCID profile (0000-0003-4853-8515 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Yijie LiuiD1 paper · The University of Tokyo

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

Brian VadasziD· 1 shared Chaoliang Hou· 1 shared Ching Man WaiiD· 1 shared Deyu FangiD· 1 shared Ermin LiiD· 1 shared Honghao BiiD· 1 shared Hongshen NiuiD· 1 shared Inci AydemiriD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperCancer Biology

Brian VadaszORCID

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2 papers

Recent·Most cited

Stromal Gasdermin D-mediated Pyroptosis Drives Maladaptive CD4⁺ T-cell Remodeling in Tet2-Deficient Hematopoiesis

Kehan Ren, Xu Han, Ermin Li, Pan Wang, Honghao Bi, Wenjie Cai, Inci Aydemir, Ching Man Wai, Hongshen Niu, Jing Yang, Yijie Liu, Brian Vadasz, Madina Jh. SUKHANOVA, Deyu Fang, Weiguo Cui, Peng Ji

This study shows that stromal gasdermin D-mediated pyroptosis promotes CD4⁺ T-cell remodeling in Tet2-deficient hematopoiesis by creating a feedback loop between stromal cells and immune cells.

bioRxiv · May 5, 2026 · PreprintCancer Biology

DEEPReditor-CMG: A deep-learning-based predictive RNA editor for crop mitochondria genomes

Sidong Qin, Zhihao Xu, Yongqiang Wang, Ziqi Wang, Yixiang Cao, Chaoliang Hou, Jiangshan Yang, Yijie Liu, Yi Xiao, Zhijun Dai, Wei Zhou, Qin Li

The paper develops DEEPReditor-CMG, a deep learning model for predicting C-to-U RNA editing sites in crop mitochondrial genomes, showing improved accuracy and uncovering evolutionary patterns.

bioRxiv · Oct 9, 2025 · PreprintBioinformatics