Author

Rei Yoshimoto

Setsunan UniversityORCID 0000-0001-6620-8996Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:experimental assay· 3 Research Focus:differential expression· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Akila MayedaiD· 3 shared Hyun-Seo KangiD· 2 shared Kazuhiro FukumuraiD· 2 shared Luca SperottoiD· 2 shared Michael SattleriD· 2 shared Daisuke KaidaiD· 1 shared Jørgen KjemsiD· 1 shared Kanae Komori· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersMolecular Biology

Akila MayedaORCID

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4 papers

Recent·Most cited

Molecular BiologyCell ReportsPeer-reviewedDec 1, 2023

SAP30BP interacts with RBM17/SPF45 to promote splicing in a subset of human short introns

Kazuhiro Fukumura, Luca Sperotto, Stefanie Seuß…·Akila Mayeda

The paper identifies a splicing mechanism in human short introns involving RBM17 and SAP30BP, showing their interaction promotes splicing through a UHM-ULM binding and recruitment to phosphorylated SF3B1.

11 citations

humanexperimental assay

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Molecular BiologybioRxivPreprintJan 12, 2022

A truncated form of the p27 CDK inhibitor translated from pre-mRNA causes G2-phase arrest

Daisuke Kaida, Takayuki Satoh, Ken Ishida…·Kanae Komori

The paper identifies a truncated p27 protein, p27*, that accumulates during G2-phase arrest induced by splicing inhibition and contributes to cell cycle arrest by inhibiting M-phase cyclins.

DOI 10.1101/2022.01.12.476115

humanprotein sequence

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Molecular BiologyNature CommunicationsPeer-reviewedAug 13, 2021

SPF45/RBM17-dependent, but not U2AF-dependent, splicing in a distinct subset of human short introns

Kazuhiro Fukumura, Rei Yoshimoto, Luca Sperotto…·Akila Mayeda

The paper identifies SPF45/RBM17 as essential for splicing a subset of human short introns, showing it competes with U2AF65 for binding to SF3B1, while U2AF is not required for this process.

37 citations

humanbulk RNA-seq

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Molecular BiologyiSciencePeer-reviewedJul 1, 2020

Biosynthesis of Circular RNA ciRS-7/CDR1as Is Mediated by Mammalian-Wide Interspersed Repeats (MIRs)

Rei Yoshimoto, Karim Rahimi, Thomas B. Hansen…·Akila Mayeda

The paper identifies mammalian-wide interspersed repeats (MIRs) as facilitators of ciRS-7 circular RNA biosynthesis, revealing a new mechanism for circRNA formation.

47 citations

humanexperimental assay

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