Author

James C. Williams

Indiana University IndianapolisORCID 0000-0001-6665-6596Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:statistical model· 5 Research Focus:cell type annotation· 4 Assay:scRNA-seq· 4 Assay:spatial transcriptomics· 4 Research Focus:differential expression· 3 Approach:benchmark study· 1 Approach:experimental assay· 1

Frequent Co-Authors

Chirag R. ParikhiD· 4 shared Krzysztof KirylukiD· 4 shared Ricardo Melo FerreiraiD· 4 shared Sanjay R. JainiD· 4 shared Tarek M. El‐AchkariD· 4 shared Ying‐Hua ChengiD· 4 shared Amanda L. KnoteniD· 3 shared Angela R. SaboiD· 3 shared

Activity by Year

2022-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersMolecular Biology

Chirag R. ParikhORCID

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Author profile →

5 papers

Recent·Most cited

Molecular BiologybioRxivPreprintSep 26, 2025

Cellular and Spatial Drivers of Unresolved Injury and Functional Decline in the Human Kidney

Blue B. Lake, Ricardo Melo Ferreira, Jens Hansen…·Sanjay R. Jain

The paper presents a multi-modal atlas of human kidney disease, identifying cellular and spatial mechanisms of injury resolution or failure and linking them to clinical outcomes.

13 citations

humanmouse

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BioinformaticsbioRxivPreprintNov 26, 2024

Integration of spatial multiplexed protein imaging and transcriptomics in the human kidney tracks the regenerative potential timeline of proximal tubules

Mahla Asghari, Angela R. Sabo, Daria Barwinska…·Pierre C. Dagher

1 citation

humanspatial transcriptomics

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GeneticsbioRxivPreprintNov 10, 2023

Single Nucleus RNA Sequencing of Remnant Kidney Biopsies and Urine Cell RNA Sequencing Reveal Cell Specific Markers of Covid-19 Acute Kidney Injury

Reetika R. Ghag, Madhurima Kaushal, Gerald Nwanne…·Sanjay R. Jain

2 citations

humanscRNA-seq

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GenomicsNaturePeer-reviewedJul 19, 2023

An atlas of healthy and injured cell states and niches in the human kidney

Blue B. Lake, Rajasree Menon, Seth Winfree…·Ljiljana Paša‐Tolić

The paper creates a high-resolution cellular atlas of healthy and injured kidney cell states and niches using single-cell and spatial technologies, identifying molecular signatures and pathways related to kidney injury.

768 citationstop 1%

humanscRNA-seq

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GenomicsbioRxivPreprintJun 22, 2022

A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury and matrix remodeling in patients with stone disease

Victor Hugo Canela, William S. Bowen, Ricardo Melo Ferreira…·the Kidney Precision Medicine Project

This study maps the spatial transcriptomic landscape of the human kidney papilla in stone disease, identifying immune injury and matrix remodeling as key features.

1 citation

humanscRNA-seq

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