Author
Thomas Schwarzl
European Molecular Biology LaboratoryORCID 0000-0001-7697-7000Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2018-2024 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 24 mutual co-author links8 papers
Recent·Most cited
- Molecular BiologyScientific DataPeer-reviewed
Transcriptional profiling of early differentiation of primary human mesenchymal stem cells into chondrocytes
Thomas Schwarzl, Andrea Keogh, Georgina Shaw…·Frank Barry
This study profiles transcriptional changes during early chondrogenic differentiation of human MSCs, identifying key regulatory processes starting within 2 hours of induction.
15 citations - Molecular BiologyNucleic Acids ResearchPeer-reviewed
Improved discovery of RNA-binding protein binding sites in eCLIP data using DEWSeq
Thomas Schwarzl, Sudeep Sahadevan, Benjamin Lang…·Gian Gaetano Tartaglia
DEWSeq improves eCLIP data analysis by increasing the detection of RNA-binding protein binding sites and their functional elements.
20 citations - Molecular BiologyNature CommunicationsPeer-reviewed
The RNA-binding protein landscapes differ between mammalian organs and cultured cells
Joel I. Perez-Perri, Dunja Ferring–Appel, Ina Huppertz…·Matthias W. Hentze
The paper characterizes RNA-binding protein landscapes in mouse organs using ex vivo eRIC, identifying over 1300 RBPs, many not previously found in cultured cells.
49 citationstop 4% - Molecular BiologyRNAPeer-reviewed
Small non-coding RNA Interactome Capture reveals pervasive, carbon source-dependent tRNA engagement of yeast glycolytic enzymes
Claudio Asencio, Thomas Schwarzl, Sudeep Sahadevan, Matthias W. Hentze
The paper introduces snRIC2C, a method to identify small non-coding RNA-binding proteins, revealing that glycolytic enzymes like GAPDH bind tRNAs in a carbon source-dependent manner.
6 citations - Molecular BiologyMolecular CellPeer-reviewed
RNA regulates Glycolysis and Embryonic Stem Cell Differentiation via Enolase 1
Ina Huppertz, Joel I. Perez-Perri, Panagiotis Mantas…·Matthias W. Hentze
The paper shows RNA regulates ENO1 enzyme activity, affecting glycolysis and stem cell differentiation in human and mouse cells.
- Molecular BiologyCellPeer-reviewed
The small non-coding vault RNA1-1 acts as a riboregulator of autophagy
Rastislav Horos, Magdalena Büscher, Rozemarijn Kleinendorst…·Matthias W. Hentze
This study identifies vault RNA1-1 as a riboregulator of autophagy by interacting with p62, showing that it modulates autophagic flux.
182 citationstop 1% - Molecular BiologyCellPeer-reviewed
The Human RNA-Binding Proteome and Its Dynamics During Arsenite-Induced Translational Arrest
Jakob Trendel, Thomas Schwarzl, Rastislav Horos…·Jeroen Krijgsveld
The paper introduces XRNAX, a method to purify protein-RNA complexes, and shows it captures all RNA biotypes and reveals dynamic changes in the RNA-bound proteome during arsenite-induced stress.
408 citationstop 1%