Ernst R. Lengyel

FEATMAP corrects acquisition signatures in medical foundation model embeddings to improve cross-condition similarity and task generalization without retraining.

The paper uses spatial proteomics to show IDO1's tumor-suppressive role in ovarian cancer by linking it to tryptophan metabolism and stress response pathways.

This study generates single-cell RNA and ATAC sequencing data from postmenopausal human fallopian tubes and ovaries, revealing distinct cell types and regulatory landscapes with implications for gynecologic diseases.

This paper presents a streamlined mass spectrometry-based proteomics workflow for analyzing FFPE tissue samples, demonstrating efficient and scalable proteome profiling of clinical specimens.

RADAR is a tool for differential methylation analysis of MeRIP-seq data, showing improved accuracy and reproducibility compared to existing methods.