Author

Omar S. Bashth

University of British ColumbiaORCID 0000-0001-8825-044XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Synthetic Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Assay:CRISPR screen· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Nika ShakibaiD· 2 shared Akihiko KondoiD· 1 shared Anne‐Sophie ArchambaultiD· 1 shared Arman AdeliD· 1 shared Bhavya Sabbineni· 1 shared Daniel Aguilar‐HidalgoiD· 1 shared Hideto MoriiD· 1 shared Hiromi ToyoshimaiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersSystems Biology

Nika ShakibaORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintDec 15, 2025

Predicting and Controlling Collective Fate in Multicellular Systems

Tiam Heydari, Omar S. Bashth, Joelle Fernandes…·Peter W. Zandstra

The paper develops a framework to predict and control collective fate in multicellular systems by identifying a control regime where a single guide cell can redirect tissue-level organization.

DOI 10.64898/2025.12.11.693804

statistical model

𝕏 PostBluesky

Synthetic BiologybioRxivPreprintJan 18, 2023

A multi-kingdom genetic barcoding system for precise target clone isolation

Soh Ishiguro, Kana Ishida, Rina C. Sakata…·Nozomu Yachie

This paper introduces CloneSelect, a multi-kingdom genetic barcoding system that enables precise isolation of target clones using CRISPR base editing to trigger reporter gene expression.

2 citations

humanmouse

𝕏 PostBluesky