Ming Ni

NASTRA is a reference-free tool for STR genotyping using nanopore sequencing, achieving 100% accuracy in diploid STR analysis across multiple platforms.

This paper introduces an improved nanopore sequencing platform called CycloneSEQ, demonstrating long-duration sequencing and high yield with applications in genomics.

DeepSS2GO predicts protein functions using secondary structure features, outperforming existing methods and achieving five times faster prediction.

The paper introduces BiFC-seq, a yeast-based method for genome-wide interactome mapping, and demonstrates its application to Ebola virus and p53 interactomes, identifying known and novel interactions.

The paper introduces HAST, a tool for haplotype-resolved assembly using trio binning, achieving high accuracy and completeness in haplotype reconstruction from synthetic long reads.

The paper shows that senescence in Escherichia coli is shaped by two stochastic processes: random cellular deterioration and asymmetric transmission of an unknown factor during cell division.