Emilio García Ríos

MetaGEAR Explorer: rapid interactive searches and cross-cohort microbiome analyses to identify disease associations of microbial genes

MetaGEAR Explorer enables cross-cohort microbiome analyses to identify disease-associated microbial genes by expanding gene searches beyond sequence similarity.

Gene-centric metagenomic analyses reveal microbiome functional insights into diseases

The paper develops MetaGEAR, a gene-centric metagenomic analysis framework, to investigate microbiome functionality in diseases and identify disease signature genes and mobile genetic elements.

Microbial oral-gut translocation in advanced chronic liver disease is linked to exacerbation of intestinal barrier dysfunction and hepatic fibrosis

The paper identifies oral-gut microbial translocation in ACLD patients linked to intestinal barrier dysfunction and hepatic fibrosis, with prtC encoding bacteria as a biomarker.

CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure

CoDNaS-Q is a database of conformational diversity in homooligomeric proteins with quaternary structure, providing curated structures and annotations for research.

CoDNaS-RNA: a database of Conformational Diversity in the Native State of RNA

CoDNaS-RNA is a database that clusters known RNA structures to identify alternative conformers and provides structural and functional annotations.