Jingyi Cai

Probing Biomass Precursor Synthesis as a Key Factor in Microbial Adaptation to Unadapted Carbon Sources

This paper introduces a computational framework, AdaptUC, to predict metabolic engineering strategies for microbial adaptation to unadapted carbon sources, showing improved driving forces and reduced substrate requirements in case studies.

Integrating thermodynamic and enzymatic constraints into genome-scale metabolic models

This paper introduces a method that integrates enzymatic and thermodynamic constraints into genome-scale metabolic models to improve pathway prediction accuracy.