Samuel J. Haynes

This study benchmarks five ARG detection tools on simulated metagenomic datasets, showing coverage and community complexity impact accuracy, with ARGprofiler leading in F1-score and computational efficiency.

The paper benchmarks eight tools for identifying and quantifying alternative polyadenylation sites from RNA-seq data using real, synthetic, and 3'-end sequencing data.

The paper investigates how cis-regulatory elements (CREs) affect gene expression in budding yeast, finding that their effects depend on both promoter and terminator contexts.