Author

Tomoya Takashima

Nara Medical UniversityORCID 0000-0002-3648-1569Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Organism:rat· 2 Approach:statistical model· 2

Frequent Co-Authors

Kazuki KurimotoiD· 3 shared Hisato KobayashiiD· 2 shared Matthew C. LorincziD· 2 shared So I NagaokaiD· 2 shared Soichiro KumamotoiD· 2 shared Toshihiro KobayashiiD· 2 shared Ana MonteagudoiD· 1 shared Asuka Miura· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersGenomics

Kazuki KurimotoORCID

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3 papers

Recent·Most cited

GenomicseLifePeer-reviewedJun 2, 2025

Post-fertilization transcription initiation in an ancestral LTR retrotransposon drives lineage-specific genomic imprinting of ZDBF2

Hisato Kobayashi, Tatsushi Igaki, Soichiro Kumamoto…·Kazuki Kurimoto

The paper shows that an ancestral LTR retrotransposon insertion in the common ancestor of Euarchontoglires drives lineage-specific genomic imprinting of ZDBF2 through post-fertilization transcription initiation.

1 citation

humanmouse

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Developmental BiologyLife Science AlliancePeer-reviewedSep 18, 2023

Histology-associated transcriptomic heterogeneity in ovarian folliculogenesis revealed by quantitative single-cell RNA-sequencing for tissue sections with DRaqL

Hiroki Ikeda, Shintaro Miyao, So I Nagaoka…·Kazuki Kurimoto

The paper develops DRaqL, a method for efficient single-cell RNA-seq from fixed tissue sections, revealing transcriptomic heterogeneity in ovarian folliculogenesis.

11 citations

mousescRNA-seq

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GenomicsGenome biologyPeer-reviewedMar 14, 2023

Conservation and divergence of canonical and non-canonical imprinting in murids

Julien Richard Albert, Toshihiro Kobayashi, Azusa Inoue…·Hisato Kobayashi

The paper identifies imprinted genes in rat tissues, finds conservation of canonical imprints in embryos but divergence in extra-embryonic tissues, and discovers novel non-canonical imprints.

24 citations

ratDNA methylation

𝕏 PostBluesky