coiaf: directly estimating complexity of infection with allele frequencies
Aris Paschalidis, Oliver John Watson, Özkan Aydemir, Robert Verity, Jeffrey A. Bailey
The paper introduces two methods to directly estimate malaria parasite complexity of infection from allele frequency data, showing comparable accuracy to existing methods and identifying continental differences in COI.
PLoS Computational Biology · Jun 9, 2023Peer-reviewedGenomics