Author

Anukana Bhattacharjee

Cincinnati Children's Hospital Medical CenterORCID 0000-0002-4459-4926Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Systems Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Nathan SalomonisiD· 3 shared Daniel Schnell· 2 shared Guangyuan LiiD· 2 shared Adam FrankishiD· 1 shared Alex S. HolehouseiD· 1 shared Andrew Herbst· 1 shared Anisa V. PrasadiD· 1 shared Anna BerensoniD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersSystems Biology

Nathan SalomonisORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms

Luke Lambourne, Kaia Mattioli, Clarissa Stephanie Santoso, Gloria Sheynkman, Sachi Inukai, Babita Kaundal, Anna Berenson, Kerstin Spirohn, Anukana Bhattacharjee, Elisabeth Rothman, Shaleen Shrestha, Florent Laval, Brent S. Carroll, Stephen P. Plassmeyer, Ryan J. Emenecker, , Juan I. Fuxman Bass

The paper identifies two categories of transcription factor isoforms with distinct molecular functions and shows they contribute to gene regulatory complexity.

Molecular Cell · Mar 27, 2025Peer-reviewedSystems Biology

Quantifying tumor specificity using Bayesian probabilistic modeling for drug target discovery and prioritization

Guangyuan Li, Daniel Schnell, Anukana Bhattacharjee, Mark Yarmarkovich, Nathan Salomonis

This paper introduces BayesTS, a Bayesian probabilistic score for tumor specificity to prioritize drug targets, demonstrating its effectiveness across multiple tissues and data types.

Cell Reports Methods · Nov 1, 2024Peer-reviewedBioinformatics

LungMAP Portal Ecosystem: Systems-Level Exploration of the Lung

Nathan Gaddis, Joshua D. Fortriede, Minzhe Guo, Eric E. Bardes, Michal Kouril, Scott Tabar, Kevin A. Burns, Mary-Anne Ardini, Stephanie Loos, Daniel Schnell, Kang Jin, Balaji Iyer, Yina Du, Bing‐Xing Huo, Anukana Bhattacharjee, , Nathan Salomonis

The paper describes the LungMAP Portal Ecosystem, a centralized resource integrating multi-omics and imaging data across species to enable standardized analysis of lung biology and disease.

American Journal of Respiratory Cell and Molecular Biology · Nov 22, 2022Peer-reviewedSystems Biology