Bing‐Xing Huo

multiVIB: A unified probabilistic contrastive learning framework for atlas-scale integration of single-cell multi-omics data

multiVIB integrates single-cell multi-omics data across modalities and species with a probabilistic contrastive learning framework, achieving state-of-the-art performance while preserving biological variation.

Establishing neuroanatomical correspondences across mouse and marmoset brain structures

The paper establishes neuroanatomical correspondences between mouse and marmoset brains by analyzing atlas structures and creating a computational tool for comparative analysis.

LungMAP Portal Ecosystem: Systems-Level Exploration of the Lung

The paper describes the LungMAP Portal Ecosystem, a centralized resource integrating multi-omics and imaging data across species to enable standardized analysis of lung biology and disease.

Cellular Anatomy of the Mouse Primary Motor Cortex

The paper provides a detailed cellular-resolution map of the mouse primary motor cortex, defining cell types and their connectivity.

Semantic segmentation of microscopic neuroanatomical data by combining topological priors with encoder-decoder deep networks

The paper introduces a hybrid deep learning architecture combining topological priors with encoder-decoder networks to improve semantic segmentation of neuroanatomical data with high precision and recall.

Solving the where problem in neuroanatomy: a generative framework with learned mappings to register multimodal, incomplete data into a reference brain

This paper introduces a generative framework to register multimodal, incomplete neuroimaging data into a reference brain atlas, enabling geometric quantification of biological and technical variation.

Detection and skeletonization of single neurons and tracer injections using topological methods

This paper introduces topological methods to detect and skeletonize neurons and tracer injections, showing improved performance over existing techniques.

Continuity between koniocellular layers of dorsal lateral geniculate and inferior pulvinar nuclei in common marmosets

The paper investigates the anatomical continuity between koniocellular layers of the dorsal lateral geniculate nucleus and the inferior pulvinar nucleus in common marmosets using immunohistochemistry and neuronal tracing.

A High-throughput Neurohistological Pipeline for Brain-Wide Mesoscale Connectivity Mapping of the Common Marmoset

This paper presents a neurohistological pipeline and grid-based tracer injection strategy for mesoscale connectivity mapping in common marmosets, enabling high-quality brain-wide connectivity matrices.

Unidirectional monosynaptic connections from auditory areas to the primary visual cortex in the marmoset monkey

The paper confirms direct, nonreciprocal auditory projections to V1 in marmoset monkeys, supporting early audiovisual integration in primates.