Author

Lianguang Shang

Agricultural Genomics Institute at ShenzhenORCID 0000-0002-4606-2800Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Longjiang FaniD· 2 shared Bilian Qian· 1 shared Chao Liu· 1 shared Chao Qin· 1 shared Chengwei LiangiD· 1 shared Chentao YangiD· 1 shared Chunling Zhang· 1 shared Chunyan XuiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenomics

Longjiang FanORCID

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2 papers

Recent·Most cited

OneGenome-Rice (OGR): A genomic foundation model for rice

Bilian Qian, Chengwei Liang, Chao Qin, Chao Liu, Chunling Zhang, Chunyan Xu, Dongxu Li, Guirong Xue, Hang He, He Zhang, Huiying He, Duoyuan Chen, Jiwei Xu, Junyang Zhang, Jian Sun, , Ziqing Deng

OneGenome-Rice (OGR) is a genomic foundation model for rice pre-trained on 422 genomes, outperforming existing models in 11 tasks and enabling downstream applications like trait analysis and gene expression prediction.

bioRxiv · May 29, 2026 · PreprintGenomics

Genetic diversity and evolution of rice centromeres

Lingjuan Xie, Yujie Huang, Wei Huang, Lianguang Shang, Yanqing Sun, Quanyu Chen, Shuangtian Bi, Mingyu Suo, Shiyu Zhang, Chentao Yang, Xiaoming Zheng, Weiwei Jin, Qian Qian, Longjiang Fan, Dongya Wu

This study analyzes rice centromeres to understand their genetic diversity and evolution, finding that structural variations and retrotransposon insertions drive centromere innovation.

Nature Genetics · Oct 21, 2025Peer-reviewedGenetics