Author

Shaunak Deota

Salk Institute for Biological StudiesORCID 0000-0002-4862-7414Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:development & morphogenesis· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Amit FulzeleiD· 2 shared Anne Gonzalez de PeredoiD· 2 shared Ullas Kolthur‐SeetharamiD· 2 shared Anna S. WardeniD· 1 shared Arjun PateliD· 1 shared Atul MalhotraiD· 1 shared Celina T. NguyeniD· 1 shared Chinthapalli Balaji· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersDevelopmental Biology

Amit FulzeleORCID

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3 papers

Recent·Most cited

GenomicsCell Reports MedicinePeer-reviewedJan 25, 2023

Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19

Michael T. Y. Lam, Sascha H. C. Duttke, Mazen Faris Odish…·Nicole G. Coufal

The paper profiles the active cistrome in peripheral leukocytes of critically ill COVID-19 patients to identify severity-associated cis-regulatory elements and their regulatory programs.

27 citations

humanbulk RNA-seq

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Developmental BiologybioRxivPreprintJun 10, 2019

NAD+-dependent deacetylase SIRT1 is essential for meiotic progression and controls repair-recombination efficiency

Harshita Kaul, Shaunak Deota, Amit Fulzele…·Ullas Kolthur‐Seetharam

This study identifies SIRT1 as essential for meiotic progression and shows it regulates repair-recombination efficiency by controlling crossover frequency and checkpoint responses.

DOI 10.1101/666891

mouseexperimental assay

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Cell BiologybioRxivPreprintSep 20, 2018

Deacetylation of catalytic lysine in CDK1 is essential for Cyclin-B binding and cell cycle

Shaunak Deota, Sivasudhan Rathnachalam, Kanojia Namrata…·Ullas Kolthur-Seetharam

This study shows that acetylation of catalytic lysine in CDK1 regulates Cyclin-B binding, with SIRT1 and P300 opposing this modification, and that acetylation mimics in yeast block cell cycle progression.

DOI 10.1101/420000

yeastexperimental assay

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