Author

Li Dong

St. Jude Children's Research Hospital

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Biology Disciplines

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Cancer Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Bensheng JuiD· 2 shared John B. EastoniD· 2 shared Alaguraj VeluchamyiD· 1 shared Alfred Thomas LookiD· 1 shared Brian J. AbrahamiD· 1 shared David T. TeacheyiD· 1 shared Haseeb ZubairiD· 1 shared Jie LviD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersCancer Biology

Bensheng JuORCID

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2 papers

Recent·Most cited

Reactivation of a TAL1 progenitor cell enhancer region by non-coding somatic variants in T-lineage acute lymphoblastic leukemia

Nadezhda V. Terekhanova, Xiaolong Chen, Kin-Hoe Chow, Yu Liu, Ying Shao, Li Dong, Bensheng Ju, Vinesh Vinayachandran, Haseeb Zubair, Kohei Hagiwara, Wentao Yang, X X, Sivaraman Natarajan, John B. Easton, David T. Teachey, , Jinghui Zhang

The paper identifies non-coding somatic variants in TAL1 regulatory regions that reactivate enhancers normally active in hematopoietic stem cells in T-lineage acute lymphoblastic leukemia.

bioRxiv · May 6, 2026 · PreprintCancer Biology

3D-super-enhancers are condensate-associated cis-regulatory communities

Jie Lv, Kelsey A. Maher, Li Dong, Virginia A. Valentine, Seth Staller, Alaguraj Veluchamy, Li Tian, Yuna Kim, Bensheng Ju, M B Valentine, John B. Easton, Stanley B Pounds, Steven Burden, Brian J. Abraham

The paper introduces BOUQUET, an algorithm that identifies 3D-super-enhancers as protein-rich cis-regulatory communities associated with co-activator condensates in mammalian cells.

Nucleic Acids Research · Feb 24, 2026Peer-reviewedMolecular Biology