Frederic Strobl

Organism-level visual genotyping of knockout zygosity enables functional gene analysis and modular combination with reporter transgenes

This paper introduces a visual genotyping method using fluorescent markers to distinguish knockout zygosity in diploid organisms, enabling scalable functional analysis of developmental genes.

Sixteen isotropic 3D fluorescence live imaging datasets of Tribolium castaneum gastrulation

The paper presents sixteen isotropic 3D fluorescence live imaging datasets of Tribolium castaneum gastrulation and early germband elongation, providing benchmark data for image processing and analysis.

Spatio-temporal segmentation of contraction waves in the extra-embryonic membranes of the red flour beetle

The paper introduces an image analysis pipeline to segment, quantify, and visualize contraction waves in 2D+t and 3D+t microscopy data of Tribolium castaneum embryos, revealing novel dynamics in extra-embryonic membranes.

How enhancers regulate wavelike gene expression patterns: Novel enhancer prediction and live reporter systems identify an enhancer associated with the arrest of pair-rule waves in the short-germ beetle Tribolium

The paper identifies enhancers in Tribolium that regulate wavelike gene expression patterns by distinguishing dynamic and static enhancers.

An ancestral apical brain region contributes to the central complex under the control of foxQ2 in the beetle Tribolium castaneum

The paper identifies foxQ2 as a key regulator of midline brain structures in Tribolium castaneum, showing its role in the development of the central complex and linking it to an ancestral neuroendocrine center.