Author

Anne Van den Broeke

Université Libre de BruxellesORCID 0000-0002-5422-0549Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Organism:chicken / avian· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ambroise MarçaisiD· 2 shared Arsène Burny· 2 shared Keith DurkiniD· 2 shared Maria ArtesiiD· 2 shared Michel GeorgesiD· 2 shared Natasa Arsic· 2 shared Olivier HermineiD· 2 shared Philip Griebel· 2 shared

Activity by Year

2016-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersSystems Biology

Ambroise MarçaisORCID

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3 papers

Recent·Most cited

Systems BiologyPLoS PathogensPeer-reviewedSep 20, 2021

The viral oncoproteins Tax and HBZ reprogram the cellular mRNA splicing landscape

Charlotte Vandermeulen, Tina M. O’Grady, Jérôme Wayet…·Jean‐Claude Twizere

This study shows that Tax and HBZ, viral oncoproteins, alter mRNA splicing in T-cells by interacting with spliceosome components, leading to changes in cancer-related genes.

36 citations

humanmultiome

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GenomicsbioRxivPreprintDec 6, 2019

Pooled CRISPR Inverse PCR sequencing (PCIP-seq): simultaneous sequencing of retroviral insertion points and the integrated provirus with long reads

Maria Artesi, Vincent Hahaut, Fereshteh Ashrafi…·Keith Durkin

PCIP-seq uses long-read sequencing to simultaneously identify retroviral insertion sites and their integrated proviruses, revealing SNPs, structural variants, and viral evolution.

5 citations

long-read sequencingexperimental assay

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MicrobiologybioRxivFeb 9, 2016

Identification and characterization of novel Bovine Leukemia Virus (BLV) antisense transcripts reveals their constitutive expression in leukemic and pre-leukemic clones

Keith Durkin, Nicolas Rosewick, Maria Artesi…·Anne Van den Broeke

DOI 10.1186/s12977-016-0267-8

chicken / avianbulk RNA-seq

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